| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra014397 |
| Family | GH3 |
| Protein Properties | Length: 644 Molecular Weight: 69928.4 Isoelectric Point: 6.8971 |
| Chromosome | Chromosome/Scaffold: 04 Start: 303990 End: 306822 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 116 | 344 | 0 |
| STRLGIPLLYAIDAVHGHNTFINATIFPHNIGLGATRDPELVKKIGAITALEVRATGIAQAFAPCVAVCRDPRWGRCYESYSEDPKLVNLMTESIMDGLQ GNAPYVADFKTKLAGCAKHFVGDGGTIDGINENNTVVDNATLFNVHMPPFELAVKKGIASIMASYSSLNGVKMHANRAMLTDYLKDTLKFQGFVISDWLG IDKITTPPRANYTYSIEASINAGIDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 644 Download |
| MAGVRSFFLF AAIALLFAGR YGDATAAARG YIKYKDPKAA VEERVEDLLT RMTLPEKLGQ 60 MCQVDRFNFS YPNPSIGQEI FTKYMIGSVL SNPYDTGANI AKRVELANTM QKLSLSTRLG 120 IPLLYAIDAV HGHNTFINAT IFPHNIGLGA TRDPELVKKI GAITALEVRA TGIAQAFAPC 180 VAVCRDPRWG RCYESYSEDP KLVNLMTESI MDGLQGNAPY VADFKTKLAG CAKHFVGDGG 240 TIDGINENNT VVDNATLFNV HMPPFELAVK KGIASIMASY SSLNGVKMHA NRAMLTDYLK 300 DTLKFQGFVI SDWLGIDKIT TPPRANYTYS IEASINAGID MVMVPWEYKE FLEKLTNLVN 360 GGYIPMSRID DAVRRVLRVK FSLGLFENPF AEGSSLAAEF GSEAHREVAR EAVRKSMVLL 420 KNGKTDNDKI VPLPKKVKKI VVAGAHANNM GWQCGGFTLT WQGFNGTGEN ISRNKAMNLP 480 TGKTRGTTIL EGIMKTVDAT TEVVYVEEPN QNTAKLHADA AYTIVVVGEA PYAESQGDST 540 TLNMAAPGPD TISHTCASGM KCVVVLVTGR PLMIEAYIDF IDAVAVAWLP GTEGQGVADV 600 LFGDHPFTGT LPRTWMKSVV QLPMNVGDSA YDPLFPFGFG ITN* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 3.0e-34 | 118 | 625 | 558 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 8.0e-35 | 417 | 642 | 242 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 1.0e-85 | 45 | 642 | 656 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 8.0e-88 | 52 | 422 | 382 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-95 | 53 | 379 | 330 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF79936.1 | 0 | 31 | 642 | 24 | 617 | exoglucanase precursor [Zea mays] |
| RefSeq | NP_001051275.1 | 0 | 6 | 642 | 3 | 619 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130296.1 | 0 | 31 | 642 | 24 | 617 | exoglucanase1 [Zea mays] |
| RefSeq | NP_191830.1 | 0 | 1 | 641 | 5 | 648 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002266470.1 | 0 | 31 | 642 | 25 | 621 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 31 | 642 | 2 | 598 | B Chain B, Ancestral Corticiod Receptor In Complex With Doc |
| PDB | 1x38_A | 0 | 31 | 642 | 2 | 598 | B Chain B, Ancestral Corticiod Receptor In Complex With Doc |
| PDB | 1lq2_A | 0 | 31 | 642 | 2 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 31 | 642 | 2 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 31 | 642 | 2 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
