| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra014445 |
| Family | GT90 |
| Protein Properties | Length: 1450 Molecular Weight: 166770 Isoelectric Point: 8.7211 |
| Chromosome | Chromosome/Scaffold: 04 Start: 670827 End: 676191 |
| Description | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT90 | 117 | 367 | 0 |
| QVPDLELLFLCHDQPGIWKKDFTQEGPNATWPPPPLFHYCSHRDAYDIVFPDWSFWGWPEVNVKEWTTLQVAIREANERVRWKDRVQYAHWKGNSYVSQE RRDLMQCNFSDKYDPMVHLYEQDWEKERENGFKSSNLEDQCTHRYKIYIEGRAWSVSKKYILACDSMALLVKPEFFDFFGRSMVPMEHYWPIRHQESCRD LKFAVEWGNNNTEKAQEIGRRGSEYMMKRLEMKYVYDYMLYVLQGYGKLMR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1450 Download |
| MMATSIVAST KKTIKIPLNC KDTTQTCPLN YPSRFKPAIS SSETCPDYFR WIHQDLKVWQ 60 ETGITRETLE RAKPNAHFRL VIKSGRLYLH QYDKCYQTRD VFTIWGILQL LKMYPGQVPD 120 LELLFLCHDQ PGIWKKDFTQ EGPNATWPPP PLFHYCSHRD AYDIVFPDWS FWGWPEVNVK 180 EWTTLQVAIR EANERVRWKD RVQYAHWKGN SYVSQERRDL MQCNFSDKYD PMVHLYEQDW 240 EKERENGFKS SNLEDQCTHR YKIYIEGRAW SVSKKYILAC DSMALLVKPE FFDFFGRSMV 300 PMEHYWPIRH QESCRDLKFA VEWGNNNTEK AQEIGRRGSE YMMKRLEMKY VYDYMLYVLQ 360 GYGKLMRLDV TVPDNATEVC SETMACPITD GGLIRQCMDD SLVTYPSVKA ACDLPQPYGD 420 DELKRFLKNQ ESAERHVEKL TNDYWEVISA RLGDGVNSFV ELRFDDQKVK TTTKLDDSSP 480 VWNERFSFNI SDTEDLSNLV LEAYVYNKTS NVTTSCLGKI RILGTAFVPY SEAVGLHYPL 540 EKEKWSVFSF GSTVRGELTL KVFITDNPSV KIPTPNPRKK LASNTSHSLH NIPASEKTKP 600 RLRKTQEPPQ PQTLSPQPPQ PQTLFSQPQT LSRQQQMLSP QPPQLQTLSP QQQMLSPQPL 660 QPHTLSTQQQ MLSPQPSKPQ TLSPQPQTLF PQQPPVMEAA PFQPVKYGSP ALGGGVRART 720 TITAHDLVEP MEYLFVKIVK ARNLPTMDPT GSLDPYVEVK LGNFTATTTQ FEKNKNPVWN 780 EVFAFTKSDQ QANFVDVIVM DKAVMKDKFV GSIRFDLNEI PTRVATDSPI APQWYIVNHE 840 RGGEVMLSVW FGTQADEAFS DATYSDALNA VNKSSVYSKV YHSPRLWYLR VNVIEAQDLV 900 IKPDRTRFPP NPYVNIKLGS QMVRTKPGQS LNPKWNEEFT FVAAEPFEDL EISIQDREET 960 LGTAKIRFDE IETRVDDNRI VPNRWFSLAL ERQTRVRFAT TRILLNVCLE GGYHVLNEST 1020 YNSSDFRPSM KEVRNRHEQS VGVLELGILG AEGLSLSRDG KKETVDAYCV AKYGTKWVRT 1080 RTVMNSLNPR FNEQYTWEVY EPATVITIGV FDNNGTNGGN IKDGKIGKVR VRISTLESGR 1140 LYTNSHPLLV LRPSGVKNMG ELHLAIRFTC TSMFQMLLHY WKPLLPKMHY VRPLKVVQQE 1200 ILREHAVNLV AARLSRAEPP LRKEVIEYIT DSNSHFWSIR KSRANLYRLR SVFSGLLGTG 1260 EWFQDICTWK KPVASTAVHV LYLAFVCLPE MILPIISLWL FMLGVWNYRL RPRQPQHMDT 1320 SLSFADNVHP EELTEEFDTF PFSSQDPGVV KMRYERLRSI AGRAQTLVGD IAGQGERVQA 1380 LLSWRDPRAT SIFMVVCLVS SVVLYVVPFK VFVLLAGLYI MRHPRLRRKT PPGLVNFFKR 1440 LPAKTDCML* 1500 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05686 | Glyco_transf_90 | 4.0e-38 | 324 | 441 | 118 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| cd04019 | C2C_MCTP_PRT_plant | 2.0e-52 | 888 | 1028 | 154 | + C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the third C2 repeat, C2C, and has a type-II topology. | ||
| pfam08372 | PRT_C | 7.0e-75 | 1293 | 1449 | 157 | + Plant phosphoribosyltransferase C-terminal. This domain is found at the C-terminus of phosphoribosyltransferases and phosphoribosyltransferase-like proteins. It contains putative transmembrane regions. It often appears together with calcium-ion dependent C2 domains (pfam00168). | ||
| pfam05686 | Glyco_transf_90 | 2.0e-87 | 40 | 235 | 204 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| smart00672 | CAP10 | 8.0e-108 | 117 | 369 | 259 | + Putative lipopolysaccharide-modifying enzyme. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_191689.1 | 0 | 446 | 1449 | 10 | 972 | C2 domain-containing protein [Arabidopsis thaliana] |
| RefSeq | XP_002271590.1 | 0 | 446 | 1449 | 9 | 1018 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511838.1 | 0 | 453 | 1449 | 21 | 1017 | synaptotagmin, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2uzp_C | 0.000001 | 734 | 842 | 22 | 132 | A Chain A, Crystal Structure Of The C2 Domain Of Human Protein Kinase C Gamma. |
| PDB | 2uzp_B | 0.000001 | 734 | 842 | 22 | 132 | A Chain A, Crystal Structure Of The C2 Domain Of Human Protein Kinase C Gamma. |
| PDB | 2uzp_A | 0.000001 | 734 | 842 | 22 | 132 | A Chain A, Crystal Structure Of The C2 Domain Of Human Protein Kinase C Gamma. |
| PDB | 4dnl_A | 0.000004 | 732 | 842 | 18 | 130 | A Chain A, Crystal Structure Of A C2 Domain Of A Protein Kinase C Alpha (Prkca) From Homo Sapiens At 1.90 A Resolution |
