y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra014453 |
Family | GT8 |
Protein Properties | Length: 664 Molecular Weight: 75951.9 Isoelectric Point: 9.8771 |
Chromosome | Chromosome/Scaffold: 04 Start: 735843 End: 738692 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 337 | 636 | 0 |
CLSMRLTIDYYLLSPEKRKFPRSENLENPNLYHYALFSDNVLAASVVVNSAIRNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMKEYYFKADHPSSGSSNLKYRNPKYLSMLNRLRFYLPEVYPKLNKILFLDDDIIVQKDLTPLWEVNLNGKVNGAVETCGESFHRF DKYLNFSNPHIARNFNPNACGWAYGMNMFDLGVEEERHHWTLWKLGTLPPGLITFYGLTHPLNKAWHVLGLGYNPSIAKKDIENAAVVHYNGNMKPWLEL |
Full Sequence |
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Protein Sequence Length: 664 Download |
MALKRGLSGV NRIRGGGGGS RSAIVVSVFL CVFAPLVFFF FVGRGVLYID SSNDYANASV 60 KQSLDWRERL AMQSLRSLFS KEASVLDVIT ASTADLGPYS LDSFKKNSLS PSWREVEVDT 120 SFRNPQENQT ASSILNAKRD TTSKGGSHQK VETPEKLYRR QLREKRRERR ANELVQQHND 180 DTILKLENAA IERSKSVDSA VLGKYSIWRR ENENDNSDSN IRLMRDQAIM ARVYSGLAKL 240 KNKTELLQEL QARIKDRQRV LGESTTDSDL PRSAHDKLRD MGQVLAKAKM QLYDCKLVTG 300 KLRAMLQTAD EQVRSLKKQS TFLAQLAAKT IPNAIHCLSM RLTIDYYLLS PEKRKFPRSE 360 NLENPNLYHY ALFSDNVLAA SVVVNSAIRN AKDPSKHVFH LVTDKLNFGA MNMWFLLNPP 420 GKATIHVENV DEFKWLNSSY CPVLRQLESA AMKEYYFKAD HPSSGSSNLK YRNPKYLSML 480 NRLRFYLPEV YPKLNKILFL DDDIIVQKDL TPLWEVNLNG KVNGAVETCG ESFHRFDKYL 540 NFSNPHIARN FNPNACGWAY GMNMFDLGVE EERHHWTLWK LGTLPPGLIT FYGLTHPLNK 600 AWHVLGLGYN PSIAKKDIEN AAVVHYNGNM KPWLELAMSK YRPYWTKYIQ FDHPYLRRCN 660 LHE* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 7.0e-168 | 217 | 663 | 464 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 2.0e-174 | 222 | 660 | 461 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 9.0e-179 | 216 | 662 | 465 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 86 | 663 | 611 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 218 | 661 | 457 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK62572.1 | 0 | 1 | 601 | 1 | 611 | AT3g61130/T20K12_30 [Arabidopsis thaliana] |
EMBL | CBI38820.1 | 0 | 44 | 663 | 42 | 681 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191672.1 | 0 | 1 | 663 | 1 | 673 | GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002272447.1 | 0 | 44 | 663 | 90 | 729 | PREDICTED: similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Vitis vinifera] |
RefSeq | XP_002511763.1 | 0 | 74 | 663 | 95 | 710 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.004 | 473 | 526 | 75 | 128 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.005 | 473 | 525 | 75 | 127 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.005 | 473 | 525 | 75 | 127 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |