y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra014510 |
Family | GH1 |
Protein Properties | Length: 579 Molecular Weight: 67140.2 Isoelectric Point: 5.9296 |
Chromosome | Chromosome/Scaffold: 04 Start: 1089173 End: 1092875 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 29 | 504 | 0 |
HSFPDGFVFGTAASAYQYEGATDEGGKSPAIWDHFSRTYPERTKMHNADVAIDFYHRYKDDIKLMKELNMDAFRFSISWARLIPSGKLKDGVNKEGIQFY KDLIDELLANDIQPSMTLYHWDHPQSLEDEYGGFLSTKIVEDFRDFARICFEEFGDKVKMWTTINEPYIMTIAGYDQGNKAAGRCSSWVNEKCHAGDSST EPYIVSHNVLLAHAAAVDEFRKSKQISHDSQIGIVLSPRWFEPFHSDSTDDKEAAERALAYEIEWHLDPVIHGDYPEIVKKYAGDKLPSFTEEESNMLKN SSDFVGINYYTARFATHIPEIDPAKPRFKTDHHVEWKLTNHSGHIIGPGDERGLILSHPEGLRKVLNYIKDRYNNIPVYIKENGINDNDDGTKPREEILK DTFRIEYHDTHIQQLHKAIVEDGCDVRGYYAWSMMDNFEWEHGYTARFGLYYVDFVNGLKRYPKDSVKWFKRFLKR |
Full Sequence |
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Protein Sequence Length: 579 Download |
MARGSRFFII LSIISLFANT IDSRTLDRHS FPDGFVFGTA ASAYQYEGAT DEGGKSPAIW 60 DHFSRTYPER TKMHNADVAI DFYHRYKDDI KLMKELNMDA FRFSISWARL IPSGKLKDGV 120 NKEGIQFYKD LIDELLANDI QPSMTLYHWD HPQSLEDEYG GFLSTKIVED FRDFARICFE 180 EFGDKVKMWT TINEPYIMTI AGYDQGNKAA GRCSSWVNEK CHAGDSSTEP YIVSHNVLLA 240 HAAAVDEFRK SKQISHDSQI GIVLSPRWFE PFHSDSTDDK EAAERALAYE IEWHLDPVIH 300 GDYPEIVKKY AGDKLPSFTE EESNMLKNSS DFVGINYYTA RFATHIPEID PAKPRFKTDH 360 HVEWKLTNHS GHIIGPGDER GLILSHPEGL RKVLNYIKDR YNNIPVYIKE NGINDNDDGT 420 KPREEILKDT FRIEYHDTHI QQLHKAIVED GCDVRGYYAW SMMDNFEWEH GYTARFGLYY 480 VDFVNGLKRY PKDSVKWFKR FLKRSIGQAK EEEVKEMLRV DWNKTLHEQV SFGESSRFFV 540 SFMATNQSKR EEENRCSSDL FYGRFDVLKK IEDSSSFY* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 1.0e-143 | 23 | 503 | 485 | + beta-glucosidase | ||
COG2723 | BglB | 3.0e-146 | 31 | 499 | 474 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02814 | PLN02814 | 3.0e-146 | 20 | 515 | 498 | + beta-glucosidase | ||
TIGR03356 | BGL | 2.0e-150 | 32 | 498 | 468 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 3.0e-172 | 30 | 504 | 478 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC16092.1 | 0 | 7 | 555 | 5 | 548 | putative beta-glucosidase [Arabidopsis thaliana] |
GenBank | AAG23719.1 | 0 | 1 | 578 | 1 | 577 | beta-glucosidase [Arabidopsis thaliana] |
RefSeq | NP_001118524.1 | 0 | 6 | 520 | 4 | 523 | BGLU29 (BETA GLUCOSIDASE 29); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_191573.1 | 0 | 1 | 578 | 1 | 577 | DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_850416.1 | 0 | 7 | 555 | 5 | 553 | BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 19 | 504 | 22 | 505 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3ptq_A | 0 | 19 | 504 | 22 | 505 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3ptm_B | 0 | 19 | 504 | 22 | 505 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3ptm_A | 0 | 19 | 504 | 22 | 505 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3ptk_B | 0 | 19 | 504 | 22 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |