| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra014636 |
| Family | GH17 |
| Protein Properties | Length: 310 Molecular Weight: 34323.6 Isoelectric Point: 9.0057 |
| Chromosome | Chromosome/Scaffold: 04 Start: 1914874 End: 1915803 |
| Description | beta-1,3-glucanase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 1 | 308 | 0 |
| MGNNIPNPSDVVAMFKQYSIPRMRMYGPNPDALNALRGSNIEFILDVPNGDLKRLADSQAEANTWVRDNVQKYNDVRFKYISVGNEVMPGGPGGVGTVLF QAMQNIDRALSAAGLSNIKVSTTTYMGAFTDTYPPSRGRFKDEYRNFLQPVIGFLVNKRSPLLVNIYTDFGFKNGDVSLRFALLQPNSNNEFTDPNNQLR YLNLFDANLDSVYAALEKSGGGSLDVVVSESGWPTQGGPGTSVPNAEAYVNNLRLHVNKNGSPKRPGKPIETYIFAMFDENLKPNDETERYFGLFSPTTR QLKYGVKF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 310 Download |
| MGNNIPNPSD VVAMFKQYSI PRMRMYGPNP DALNALRGSN IEFILDVPNG DLKRLADSQA 60 EANTWVRDNV QKYNDVRFKY ISVGNEVMPG GPGGVGTVLF QAMQNIDRAL SAAGLSNIKV 120 STTTYMGAFT DTYPPSRGRF KDEYRNFLQP VIGFLVNKRS PLLVNIYTDF GFKNGDVSLR 180 FALLQPNSNN EFTDPNNQLR YLNLFDANLD SVYAALEKSG GGSLDVVVSE SGWPTQGGPG 240 TSVPNAEAYV NNLRLHVNKN GSPKRPGKPI ETYIFAMFDE NLKPNDETER YFGLFSPTTR 300 QLKYGVKFN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 221 | 296 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-113 | 1 | 308 | 312 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX76839.1 | 0 | 1 | 309 | 54 | 363 | beta-1,3-glucanase [Brassica rapa subsp. chinensis] |
| GenBank | ABC94639.1 | 0 | 1 | 309 | 41 | 346 | glucanase [Brassica juncea] |
| GenBank | ABO87659.1 | 0 | 1 | 309 | 41 | 351 | beta-1,3 glucanase [Brassica oleracea] |
| RefSeq | NP_191285.1 | 0 | 1 | 309 | 39 | 339 | BGL2 (BETA-1,3-GLUCANASE 2); cellulase/ glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Swiss-Prot | P49236 | 0 | 1 | 309 | 34 | 342 | E13B_BRACM RecName: Full=Glucan endo-1,3-beta-glucosidase; AltName: Full=(1- |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 1 | 309 | 10 | 315 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 3ur8_A | 0 | 1 | 309 | 10 | 315 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 3ur7_B | 0 | 1 | 309 | 10 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 1 | 309 | 10 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 1 | 309 | 10 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FY434021 | 263 | 1 | 263 | 0 |
| FY419887 | 226 | 1 | 226 | 0 |
| FY444291 | 212 | 99 | 310 | 0 |
| FY444113 | 210 | 101 | 310 | 0 |
| FY419567 | 211 | 1 | 211 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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