| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra014638 |
| Family | GH17 |
| Protein Properties | Length: 294 Molecular Weight: 32922.1 Isoelectric Point: 5.0349 |
| Chromosome | Chromosome/Scaffold: 04 Start: 1942442 End: 1943323 |
| Description | beta-1,3-glucanase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 1 | 292 | 0 |
| MYKQYDIQRMRMYAPKTEALEALRGSNIEFILDVPNGELEGIANSQASANTWVRDNVQKYNDVRFKYISVGNEVKPADTAGKGTTLIQAIQNIDKALSEA GLSIPVSTTTYMGAFMDTYPPSRGRFSDEYLNFLKPVIGFLVSKRYPLLVNIYTYFGFKNGDVSLEFSLFKPSSNEFKDDNNQLDYKNLFDANLDSVYAA LDKLGGGSLEVVVSESGWPTQGGLGASLENAKDYINNLIQHVKNGSPRRPGKAIETYIFAMFDENQKPNDETERYFGLFLPTTKQLKYSVNF | |||
| Full Sequence |
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| Protein Sequence Length: 294 Download |
| MYKQYDIQRM RMYAPKTEAL EALRGSNIEF ILDVPNGELE GIANSQASAN TWVRDNVQKY 60 NDVRFKYISV GNEVKPADTA GKGTTLIQAI QNIDKALSEA GLSIPVSTTT YMGAFMDTYP 120 PSRGRFSDEY LNFLKPVIGF LVSKRYPLLV NIYTYFGFKN GDVSLEFSLF KPSSNEFKDD 180 NNQLDYKNLF DANLDSVYAA LDKLGGGSLE VVVSESGWPT QGGLGASLEN AKDYINNLIQ 240 HVKNGSPRRP GKAIETYIFA MFDENQKPND ETERYFGLFL PTTKQLKYSV NFN* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 7.0e-6 | 206 | 279 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-121 | 1 | 292 | 297 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX76839.1 | 0 | 1 | 293 | 67 | 363 | beta-1,3-glucanase [Brassica rapa subsp. chinensis] |
| GenBank | ABC94639.1 | 0 | 1 | 293 | 54 | 346 | glucanase [Brassica juncea] |
| GenBank | ABO87659.1 | 0 | 1 | 293 | 54 | 351 | beta-1,3 glucanase [Brassica oleracea] |
| RefSeq | NP_191285.1 | 0 | 1 | 293 | 52 | 339 | BGL2 (BETA-1,3-GLUCANASE 2); cellulase/ glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Swiss-Prot | P49236 | 0 | 1 | 293 | 47 | 342 | E13B_BRACM RecName: Full=Glucan endo-1,3-beta-glucosidase; AltName: Full=(1- |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 1 | 293 | 22 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 1 | 293 | 22 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 1 | 293 | 22 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 1 | 293 | 22 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3em5_D | 0 | 1 | 293 | 22 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FY434021 | 249 | 1 | 247 | 0 |
| EX061637 | 228 | 67 | 294 | 0 |
| FY444291 | 231 | 65 | 294 | 0 |
| FY444113 | 208 | 88 | 294 | 0 |
| FD945391 | 202 | 94 | 294 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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