PlantCAZyme

CAZyme Information

Basic Information
Species	Brassica rapa
Cazyme ID	Bra014901
Family	GT77
Protein Properties	Length: 637 Molecular Weight: 73672.5 Isoelectric Point: 5.7127
Chromosome	Chromosome/Scaffold: 07 Start: 5400481 End: 5410754
Description
View CDS

External Links
NCBI Taxonomy
CAZyDB

External Links

NCBI Taxonomy

CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GT77	466	597	7.4e-32
VLVDMDTVWLRDPFPRLIPDVDFQIACDRFNGNSSDTRNYADGGFKFVVANHRTIEFYNYWYESRLRYPGNNEQDVINKIKGNKYLNKIGLKMRFLDTTH VGNFCQRNWDITKVCVMHGNCCIGQDNKIKDL

Full Sequence
Protein Sequence Length: 637 Download
MATGSGHVKV GDRESQTQKQ RHLHQLIDVR KTVYFFTFTV FLSPLIYHSA SRITVLPLPQ 60 LSNIFAFQPL LIAAKDNTDK LEAEDGRDLA RILRESSMIE NKTVIVVMMN QAWAEPNSSF 120 DVFFEGFHAG EGTEKLLRHV VVDMDTIWLR DPFPRLLAEV DFQVAGDYYN FNGNSSDLRN 180 GANGGFNFVV SNCRTIAFYS YWYASRLRTD LEKSEQLLET AEELLSKVEK EAKKLKTELE 240 TVKEEKKHSL KREQMLSEEK NKILSELERS KEEEEKSEIA MQSLASALHQ EASKLKETLL 300 SLGCQDYETH IEDLKLVIKS TNLKYEKTLH EVEITKKQFE SSMVDWEMRE AGLVNHVKKF 360 DEEVSSMGKE MNRLGNLVKR AMEEAAAALK KESEMKDDLK DVEDEGQFEA EDSKNLERIL 420 REASMAEKTV IVTMMNQAYA DLNSTFDVFL EGFQVGDGTE KLLRHVLVDM DTVWLRDPFP 480 RLIPDVDFQI ACDRFNGNSS DTRNYADGGF KFVVANHRTI EFYNYWYESR LRYPGNNEQD 540 VINKIKGNKY LNKIGLKMRF LDTTHVGNFC QRNWDITKVC VMHGNCCIGQ DNKIKDLRQV 600 LDDWTAYFSN GDRAREFRQP MNCWRSLRRQ YNKERG* 660

Full Sequence

Protein Sequence Length: 637 Download

MATGSGHVKV GDRESQTQKQ RHLHQLIDVR KTVYFFTFTV FLSPLIYHSA SRITVLPLPQ    60
LSNIFAFQPL LIAAKDNTDK LEAEDGRDLA RILRESSMIE NKTVIVVMMN QAWAEPNSSF    120
DVFFEGFHAG EGTEKLLRHV VVDMDTIWLR DPFPRLLAEV DFQVAGDYYN FNGNSSDLRN    180
GANGGFNFVV SNCRTIAFYS YWYASRLRTD LEKSEQLLET AEELLSKVEK EAKKLKTELE    240
TVKEEKKHSL KREQMLSEEK NKILSELERS KEEEEKSEIA MQSLASALHQ EASKLKETLL    300
SLGCQDYETH IEDLKLVIKS TNLKYEKTLH EVEITKKQFE SSMVDWEMRE AGLVNHVKKF    360
DEEVSSMGKE MNRLGNLVKR AMEEAAAALK KESEMKDDLK DVEDEGQFEA EDSKNLERIL    420
REASMAEKTV IVTMMNQAYA DLNSTFDVFL EGFQVGDGTE KLLRHVLVDM DTVWLRDPFP    480
RLIPDVDFQI ACDRFNGNSS DTRNYADGGF KFVVANHRTI EFYNYWYESR LRYPGNNEQD    540
VINKIKGNKY LNKIGLKMRF LDTTHVGNFC QRNWDITKVC VMHGNCCIGQ DNKIKDLRQV    600
LDDWTAYFSN GDRAREFRQP MNCWRSLRRQ YNKERG*                             660

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam03407	Nucleotid_trans	5.0e-13	143	216	75	+ Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases.
pfam03407	Nucleotid_trans	5.0e-38	466	597	139	+ Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases.

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	AAD21699.1	1e-17	143	228	1082	1168	Contains reverse transcriptase domain (rvt) PF
GenBank	AAD21699.1	0	462	633	1073	1247	Contains reverse transcriptase domain (rvt) PF
RefSeq	NP_567479.5	0	411	630	28	312	unknown protein [Arabidopsis thaliana]
Swiss-Prot	P0C042	1e-24	84	219	37	225	Y4597_ARATH RecName: Full=Uncharacterized protein At4g15970
Swiss-Prot	P0C042	0	377	630	5	321	Y4597_ARATH RecName: Full=Uncharacterized protein At4g15970

Hydropathy

EST Download unfiltered results here

Hit	Length	Start	End	EValue
EV047881	160	466	623	0
ES968198	160	466	623	0
EV115516	144	466	609	0
EV047881	68	140	207	0.0000000000008
ES968198	68	140	207	0.000000000001

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_053_00097.1	Aquca_053_00106.1	Aquca_002_01394.1	Aquca_040_00051.1	Aquca_053_00096.1
Arabidopsis thaliana	AT5G44820.1	AT4G19970.1.489.686	AT4G19970.1.489.686	AT1G28710.3	AT1G28710.2
	AT1G28710.1	AT1G28700.1	AT2G02061.1	AT1G14590.1	AT4G19970.1.149.346
	AT4G19970.1.149.346	AT4G15970.1	AT1G28695.1	AT5G40900.1
Brachypodium distachyon	Bradi2g59017.1	Bradi1g52610.1	Bradi2g58994.1	Bradi5g19577.1	Bradi1g09720.1
	Bradi3g51990.1	Bradi1g76460.1	Bradi1g01750.1	Bradi1g01760.1	Bradi2g58987.1
	Bradi1g49780.1	Bradi4g34530.1	Bradi4g34540.1	Bradi2g59010.1	Bradi4g34570.1
	Bradi3g41140.1	Bradi2g59027.1	Bradi4g34590.1	Bradi4g34520.1	Bradi2g59001.1
Brassica rapa	Bra025100	Bra025101	Bra012524	Bra014090	Bra002916
	Bra024835	Bra013434	Bra027575	Bra038406	Bra028479
	Bra021946
Carica papaya	evm.model.supercontig_13.215	evm.model.supercontig_30.146	evm.model.supercontig_2.84	evm.model.supercontig_2596.1	evm.model.supercontig_1017.2
Capsella rubella	Carubv10026625m	Carubv10004249m.489.686	Carubv10004249m.489.686	Carubv10019169m	Carubv10009619m
	Carubv10009437m	Carubv10004249m.147.344	Carubv10004249m.147.344	Carubv10027641m	Carubv10027757m
	Carubv10007406m	Carubv10011614m	Carubv10012005m	Carubv10006582m
Citrus clementina	Ciclev10010447m	Ciclev10020796m	Ciclev10006749m	Ciclev10008749m	Ciclev10008659m
	Ciclev10018179m	Ciclev10018159m
Citrus sinensis	orange1.1g040326m	orange1.1g017526m	orange1.1g016761m	orange1.1g044643m	orange1.1g018473m
	orange1.1g017033m	orange1.1g016995m	orange1.1g038629m
Cucumis sativus	Cucsa.256730.1	Cucsa.194020.1	Cucsa.377380.1	Cucsa.112460.1
Eucalyptus grandis	Eucgr.A02942.1	Eucgr.K00112.1	Eucgr.H00616.2	Eucgr.H00616.1	Eucgr.G02042.1
	Eucgr.D01203.1	Eucgr.E01659.1
Fragaria vesca	mrna00598.1-v1.0-hybrid	mrna21406.1-v1.0-hybrid	mrna09286.1-v1.0-hybrid	mrna05326.1-v1.0-hybrid
Glycine max	Glyma16g34240.2	Glyma16g34260.2	Glyma03g25600.2	Glyma03g25590.2	Glyma07g13220.2
	Glyma07g19600.2	Glyma20g24350.1	Glyma20g00871.2	Glyma20g00871.1	Glyma10g42700.2
	Glyma16g34271.2	Glyma16g34271.1	Glyma16g34250.2	Glyma09g34480.4	Glyma09g34480.3
	Glyma09g34480.2	Glyma09g34480.1	Glyma16g34280.1	Glyma09g29670.1	Glyma17g21810.2
	Glyma16g06180.1
Gossypium raimondii	Gorai.004G068600.1	Gorai.005G155400.2	Gorai.005G155400.1	Gorai.004G068700.1	Gorai.008G110400.1
	Gorai.008G169200.2	Gorai.008G169200.1
Linum usitatissimum	Lus10017981	Lus10034422	Lus10019139	Lus10017982	Lus10032455
	Lus10031330	Lus10031903	Lus10031927	Lus10041973	Lus10041976
	Lus10041977	Lus10041975
Malus domestica	MDP0000197874	MDP0000234123	MDP0000298955	MDP0000305973.152.349	MDP0000305973.152.349
	MDP0000305973.476.673	MDP0000305973.476.673	MDP0000785615	MDP0000646858	MDP0000309587
	MDP0000248652	MDP0000225024	MDP0000215737
Manihot esculenta	cassava4.1_021057m	cassava4.1_008667m	cassava4.1_026163m	cassava4.1_009155m	cassava4.1_026132m
Medicago truncatula	Medtr1g034810.1	Medtr6g081060.1	AC202489_10.1	Medtr1g044340.1
Mimulus guttatus	mgv1a007746m	mgv1a013635m	mgv1a024088m	mgv1a020419m	mgv1a011268m
	mgv1a007657m	mgv1a022000m	mgv1a009278m
Oryza sativa	LOC_Os03g03730.1	LOC_Os07g19444.1	LOC_Os04g49590.1	LOC_Os03g52160.1	LOC_Os01g69140.1
	LOC_Os02g46120.2	LOC_Os02g46120.1	LOC_Os03g63270.1	LOC_Os03g63280.1	LOC_Os01g69160.1
	LOC_Os08g41800.1	LOC_Os01g69200.1	LOC_Os01g69190.1
Panicum virgatum	Pavirv00048073m	Pavirv00036490m	Pavirv00004969m	Pavirv00061166m	Pavirv00001745m
	Pavirv00001744m	Pavirv00029787m	Pavirv00013532m	Pavirv00004840m	Pavirv00048329m
	Pavirv00045318m	Pavirv00060429m	Pavirv00065844m	Pavirv00029786m	Pavirv00008953m
	Pavirv00004842m	Pavirv00060898m	Pavirv00032687m	Pavirv00010532m	Pavirv00040930m
	Pavirv00043582m	Pavirv00029788m	Pavirv00040931m	Pavirv00010531m	Pavirv00015487m
	Pavirv00037239m	Pavirv00053993m	Pavirv00031613m	Pavirv00061238m	Pavirv00055330m
	Pavirv00050538m	Pavirv00041792m
Physcomitrella patens	Pp1s68_81V6.1	Pp1s98_155V6.1	Pp1s69_44V6.1.146.245	Pp1s69_44V6.1.146.245	Pp1s98_155V6.3
	Pp1s68_125V6.1	Pp1s111_58V6.1	Pp1s69_44V6.1.62.138	Pp1s69_44V6.1.62.138	Pp1s98_155V6.2
Phaseolus vulgaris	Phvul.007G020400.1	Phvul.010G044600.1	Phvul.010G044400.1	Phvul.003G008500.1	Phvul.004G142200.1
	Phvul.004G142100.1	Phvul.004G142300.1	Phvul.001G094600.2	Phvul.001G094600.1
Picea abies	MA_501889g0010	MA_132232g0010	MA_607856g0010	MA_10428482g0010	MA_10432108g0010
	MA_10434802g0010	MA_386090g0010	MA_8135787g0010	MA_373999g0010	MA_184747g0010
	MA_898978g0010	MA_10433997g0010	MA_140045g0010	MA_9004089g0010	MA_179108g0010
	MA_10429744g0010	MA_6668110g0010	MA_8547205g0010	MA_175330g0010	MA_955315g0010
	MA_37650g0010
Populus trichocarpa	Potri.014G051600.1	Potri.012G037300.1	Potri.015G029200.3	Potri.015G029200.2	Potri.015G029200.1
	Potri.012G114800.1	Potri.012G113200.1	Potri.012G112600.1	Potri.010G099400.2	Potri.010G099400.1
	Potri.002G139800.1	Potri.008G142200.2	Potri.008G142200.1	Potri.015G110600.1
Prunus persica	ppa007679m	ppa022545m	ppa006741m	ppa021342m	ppa017327m
	ppa018804m	ppa020835m	ppa008443m
Ricinus communis	29780.m001366	29709.m001183	30147.m014364	28613.m000139	30190.m010943
Setaria italica	Si036243m	Si029892m	Si040232m	Si001490m	Si032504m
	Si039211m	Si017461m	Si012694m	Si036241m	Si035913m
	Si002012m	Si013954m	Si003819m	Si003892m	Si027875m
	Si030349m	Si032505m	Si004175m	Si030341m	Si001867m
Sorghum bicolor	Sb03g044030.1	Sb01g048460.1	Sb06g026610.1	Sb02g009460.2	Sb02g009460.1
	Sb03g044020.1	Sb04g031550.1	Sb01g001260.1	Sb07g026310.1	Sb01g001250.1
	Sb02g029220.1	Sb02g019390.1	Sb03g044060.1	Sb03g044050.1	Sb03g044040.1
	Sb01g009150.1	Sb03g044070.1
Thellungiella halophila	Thhalv10025579m	Thhalv10000930m	Thhalv10000936m	Thhalv10000933m	Thhalv10028197m
	Thhalv10029163m	Thhalv10027358m	Thhalv10011621m	Thhalv10025388m	Thhalv10004358m
	Thhalv10025491m	Thhalv10000928m	Thhalv10026960m	Thhalv10001209m	Thhalv10026780m
	Thhalv10009446m	Thhalv10009695m	Thhalv10026794m
Vitis vinifera	GSVIVT01018317001	GSVIVT01029389001.419.532	GSVIVT01029389001.419.532	GSVIVT01018316001	GSVIVT01010291001
	GSVIVT01024334001	GSVIVT01029389001.108.221	GSVIVT01029389001.108.221
Zea mays	AC211891.4_FGT003

Orthologous Group

Species

Aquilegia coerulea

Arabidopsis thaliana

AT5G44820.1

AT4G19970.1.489.686

AT1G28710.3