| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra014947 |
| Family | AA3 |
| Protein Properties | Length: 746 Molecular Weight: 81625.4 Isoelectric Point: 7.6766 |
| Chromosome | Chromosome/Scaffold: 07 Start: 5014567 End: 5017789 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 203 | 739 | 2.8026e-45 |
| ETEQTLLESLTQKGLEADTDHDAIRIKCDAVVVGSGSGGGVAASVLAKAGLKVIVMEKGSYYTESDYPPFEGHGMEKLYENGGILPSIDGCLMILAGATV GGGSAVNWSACIKTPKSVLQEWSEDHKIPLFGTKEYVSAMDLVWKRMGVTETCEKEGFQNQVLRKGCENLGINVQNVARNSSEKHYCGSCGYGCRQGEKK GSDRTWLVDAVSHGAVVLTGCKAERFILEKNGNKNRGGKKMKCLGVLSKSLNGNIAKKIKIEAKVTVSAAGSLLTPPLMISSGLRNRHIGKNLHLHPVLM AWGYFSDKESSSSNFKGKSYEGGIITSMSKVLSEDSEVRAIIETPALGPASFSVLCPWTSGVDMKKRMSRYSRTANLITIVRDRGSGEVKTEGRISYVVD KTDKENLRAGLRQSLRILIAAGAEEVGTHRSDGQKLVCKGVDEKSIEEFLDSVSAEEGPKAMTEKWGVYSSAHQMGSCRIGEDEKEGALDLNGESWEAER LFVCDGSVLPSAVGVNPMITIMSTAYCISTRIVKSMT | |||
| Full Sequence |
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| Protein Sequence Length: 746 Download |
| MGNHTDARNF GHREVTAAEM ESLASFCEAV LPPVPHPEEL LGEDDHHPNK EALRSFYTTC 60 GSQTPVARQT IDLIIKRGTM EAYLATRLVL FLLATRLGTL LICGTECLVS SWPFVEKFSE 120 LTLEKRERVL QKQFRNWFLT PIRAAFVYIK VAFLFCFFSR VSSNGENPAW EAIGYRVNLD 180 ENKPSETRKE RPLEKGVVET MKETEQTLLE SLTQKGLEAD TDHDAIRIKC DAVVVGSGSG 240 GGVAASVLAK AGLKVIVMEK GSYYTESDYP PFEGHGMEKL YENGGILPSI DGCLMILAGA 300 TVGGGSAVNW SACIKTPKSV LQEWSEDHKI PLFGTKEYVS AMDLVWKRMG VTETCEKEGF 360 QNQVLRKGCE NLGINVQNVA RNSSEKHYCG SCGYGCRQGE KKGSDRTWLV DAVSHGAVVL 420 TGCKAERFIL EKNGNKNRGG KKMKCLGVLS KSLNGNIAKK IKIEAKVTVS AAGSLLTPPL 480 MISSGLRNRH IGKNLHLHPV LMAWGYFSDK ESSSSNFKGK SYEGGIITSM SKVLSEDSEV 540 RAIIETPALG PASFSVLCPW TSGVDMKKRM SRYSRTANLI TIVRDRGSGE VKTEGRISYV 600 VDKTDKENLR AGLRQSLRIL IAAGAEEVGT HRSDGQKLVC KGVDEKSIEE FLDSVSAEEG 660 PKAMTEKWGV YSSAHQMGSC RIGEDEKEGA LDLNGESWEA ERLFVCDGSV LPSAVGVNPM 720 ITIMSTAYCI STRIVKSMTT TCLSY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02462 | pyranose_ox | 0.005 | 675 | 739 | 65 | + pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation. | ||
| COG2303 | BetA | 8.0e-21 | 299 | 736 | 489 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 2.0e-21 | 596 | 730 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| pfam00732 | GMC_oxred_N | 1.0e-90 | 277 | 500 | 227 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC87643.1 | 0 | 69 | 740 | 2 | 674 | alcohol oxidase [Arabidopsis thaliana] |
| EMBL | CAN71289.1 | 0 | 16 | 738 | 23 | 735 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_566729.1 | 0 | 1 | 740 | 1 | 742 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002285334.1 | 0 | 16 | 738 | 23 | 735 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311685.1 | 0 | 2 | 738 | 11 | 741 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1kdg_B | 0.000002 | 231 | 735 | 9 | 540 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1kdg_A | 0.000002 | 231 | 735 | 9 | 540 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1naa_B | 0.000002 | 231 | 735 | 4 | 535 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1naa_A | 0.000002 | 231 | 735 | 4 | 535 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1b8s_A | 0.0005 | 675 | 740 | 442 | 502 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 625 | 112 | 734 | 0 |
| HO779224 | 460 | 203 | 660 | 0 |
| DK534935 | 252 | 495 | 746 | 0 |
| FD936762 | 241 | 506 | 746 | 0 |
| EV573918 | 223 | 524 | 746 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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