| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra015104 |
| Family | GT8 |
| Protein Properties | Length: 570 Molecular Weight: 65385.1 Isoelectric Point: 9.4087 |
| Chromosome | Chromosome/Scaffold: 07 Start: 3466683 End: 3468479 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 226 | 542 | 0 |
| CLAMRLMEERIAHPEKYTDEGKARAAELDDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKEYKGAHVEVKAVEDYT FLNSSYVPVLKQLESANLQKFYFENKLENATKDTTNMKFRNPKYLSILNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWEIDMDGKVNGAVETCFGS FHRYAQYMNFSHPLIKEKFNPKACAWAYGMNFFDLDAWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITFYSTTKPLDKTWHVLGLGYNPSISMDEIR NAAVVHFNGNMKPWLDI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 570 Download |
| MATHHRLLRG GGSPAFSVSG IRFRLTALAA TIALSFFTLS FLFTSESNHS PDLHLPVSSQ 60 SLNLIRYSNG VGSIRRSMLD IKSDPLKPRL LQIQKQADDH RSLALAYASY ARKLKLENSK 120 LVRIFADLSR NYTDLISKPT YRALYDSDGS SIEESTLRQF EKEVKERIKM TRQVIAEAKE 180 SFDNQLKIQK LKDTIFAVNE QLTNAKKQGA FSSLIAAKSI PKGLHCLAMR LMEERIAHPE 240 KYTDEGKARA AELDDPSLYH YAIFSDNVIA ASVVVNSAVK NAKEPWKHVF HVVTDKMNLG 300 AMQVMFKLKE YKGAHVEVKA VEDYTFLNSS YVPVLKQLES ANLQKFYFEN KLENATKDTT 360 NMKFRNPKYL SILNHLRFYL PEMYPKLHRI LFLDDDVVVQ KDLTGLWEID MDGKVNGAVE 420 TCFGSFHRYA QYMNFSHPLI KEKFNPKACA WAYGMNFFDL DAWRREKCTE EYHYWQNLNE 480 NRTLWKLGTL PPGLITFYST TKPLDKTWHV LGLGYNPSIS MDEIRNAAVV HFNGNMKPWL 540 DIAMNQFRPL WTKHVDHDLE FVQACNFGL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06429 | GT8_like_1 | 4.0e-119 | 259 | 556 | 300 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02910 | PLN02910 | 2.0e-160 | 167 | 566 | 405 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 1.0e-170 | 162 | 566 | 409 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 6.0e-173 | 95 | 567 | 478 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 0 | 1 | 569 | 569 | + galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92560.1 | 0 | 1 | 569 | 1 | 554 | unknown [Populus trichocarpa] |
| RefSeq | NP_189150.1 | 0 | 1 | 569 | 1 | 559 | QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002273962.1 | 0 | 68 | 569 | 57 | 536 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301803.1 | 0 | 1 | 569 | 1 | 554 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
| RefSeq | XP_002532733.1 | 0 | 70 | 569 | 67 | 566 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
