| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra015236 |
| Family | GH35 |
| Protein Properties | Length: 622 Molecular Weight: 69255.9 Isoelectric Point: 7.5682 |
| Chromosome | Chromosome/Scaffold: 10 Start: 3105093 End: 3107844 |
| Description | beta-galactosidase 15 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 1 | 132 | 0 |
| MAQSLDVGVPWIMCQQNDAPQPMLNTCNGFYCDNFVPNNPNTPKMWTENWTGWFKQWGGKNPHRTTEDVAFSVARFFQRGGTFNNYYMYHGGTNFDRTAG GPYITTSYDYDAPLDEYGNLSQPKYGHLKQLH | |||
| Full Sequence |
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| Protein Sequence Length: 622 Download |
| MAQSLDVGVP WIMCQQNDAP QPMLNTCNGF YCDNFVPNNP NTPKMWTENW TGWFKQWGGK 60 NPHRTTEDVA FSVARFFQRG GTFNNYYMYH GGTNFDRTAG GPYITTSYDY DAPLDEYGNL 120 SQPKYGHLKQ LHDVLHSIEK TLTYGNISTI DFGNSASATI YKTEEGSSCF FGNGNEKSDA 180 TISFQGESYV VPAWSVTILP DCKKEAYNTA KITTQTSMMV KKPNEAENTP STLKWSWRPE 240 NMDNFLLKGK GESTQTQLFD QKVVTNDQSD YLWYMTTVKF KKRDPFLGKN MSLRVNSTAH 300 VLHAFVNGKH IGSQHAENGK FNYVFEKDVK FKSGRNVIAL LSITVGLANY GAFFESKPAG 360 ITGPIFITGR NGDETIVKDL SAHKWSYKTG LIGFESQLFR TESMSKWSVE SVPFNRTMIW 420 YKTTFKSPLG NDPVVVDLMG LGKGTAWVNG NNIGRYWPAF ISSENGCDAK CNYRGAYHAE 480 KCLTNCGEPT QRWYHVPRFF LNAEGDNTLV LFEEIGGNPS LVSFQTTRVG SLCANVYEKS 540 IIELSCDRKP ISAIKFASFG NPDGNCGSFE KGTCESSKNT ADILTQECVG KEKCSIDVST 600 KRFGTPDCSG AVRSLAVEAI C* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 3.0e-17 | 544 | 621 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 9.0e-61 | 1 | 132 | 144 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 621 | 648 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAJ09953.1 | 0 | 1 | 621 | 204 | 827 | beta-galactosidase [Mangifera indica] |
| EMBL | CBI27773.1 | 0 | 1 | 621 | 218 | 835 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683341.1 | 0 | 1 | 621 | 223 | 786 | BGAL15 (beta-galactosidase 15); beta-galactosidase [Arabidopsis thaliana] |
| Swiss-Prot | Q9C6W4 | 0 | 1 | 621 | 200 | 779 | BGL15_ARATH RecName: Full=Beta-galactosidase 15; Short=Lactase 15; Flags: Precursor |
| RefSeq | XP_002276918.1 | 0 | 1 | 621 | 149 | 766 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.000000000001 | 8 | 131 | 187 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.0000000005 | 40 | 141 | 237 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 0.0000000005 | 40 | 141 | 237 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778160 | 536 | 1 | 529 | 0 |
| HO780602 | 533 | 1 | 524 | 0 |
| ES271655 | 183 | 91 | 273 | 0 |
| HO795552 | 444 | 1 | 438 | 0 |
| DY264749 | 325 | 1 | 322 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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