| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra015283 |
| Family | AA3 |
| Protein Properties | Length: 755 Molecular Weight: 83307 Isoelectric Point: 7.9396 |
| Chromosome | Chromosome/Scaffold: 10 Start: 2714836 End: 2717483 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 208 | 753 | 0 |
| KGIIETAKEDEATIKQLMINKGLKLKEDKESNTFKIECDAVVIGSGCGGGVAAANLAKSGLKVIVVEKGNYFVPQDYSTLEGPSMFEMFEANGLLMTHDG RFRFMAGSTLGGGSVVNWAASLKTPDAIIEEWSVDRGIATFDREGYTAAMESVCKRICVTERVIREGFQNQILRKGCEKLGLDVTVVPRNSSEEHYCGSC SFGCKTGDKRGTDITWLVDAVDNNAVILTQCRAEKLIFAETESGRRKKRCLGVTTSISNTAINKIEINAKVTVVACGSLMTPGLLSSSGLKNHNIGRGLH IHPILMAWGYFPEKNSNFNGAAHEGEIMTSLHYVFEIDSTTPNITLETPALGPGTFAALIPWVSGKDTKERLAKYSRTSHIFVMVRDEGVGEVKGGIVKY KLTKADEENLTTGLRRALRILVAAGAEEVGTYRSDGQRLKCGGVKEEDLEKFLETVDAPAGVVSMSRRWTHSFTAHQMGCCRMGATEEEGAVDGYGESWE AEGLYVCDASVLPTALGVNPMVTIQSTAYCISKRLAALMMKNKKKQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 755 Download |
| MVGGTRDKKR GHPLLRWSTK QETFSHGFSQ SDLQALSAIC EAIMPPVPLL SLDLDMKLKV 60 LRNDALLSFF KSSGSHVRPD EVAEVMATKA MPVTVTVVRI VLRLLTFRLG TLLLCGFVCL 120 DKKNWSFLLL KFSDISLEKR EKVLQKWNKQ WYNPLARIAF MMIKAIFLFY YFTWTNENTE 180 NPAWDAIGYK VDIGENEDIE RKQRPLEKGI IETAKEDEAT IKQLMINKGL KLKEDKESNT 240 FKIECDAVVI GSGCGGGVAA ANLAKSGLKV IVVEKGNYFV PQDYSTLEGP SMFEMFEANG 300 LLMTHDGRFR FMAGSTLGGG SVVNWAASLK TPDAIIEEWS VDRGIATFDR EGYTAAMESV 360 CKRICVTERV IREGFQNQIL RKGCEKLGLD VTVVPRNSSE EHYCGSCSFG CKTGDKRGTD 420 ITWLVDAVDN NAVILTQCRA EKLIFAETES GRRKKRCLGV TTSISNTAIN KIEINAKVTV 480 VACGSLMTPG LLSSSGLKNH NIGRGLHIHP ILMAWGYFPE KNSNFNGAAH EGEIMTSLHY 540 VFEIDSTTPN ITLETPALGP GTFAALIPWV SGKDTKERLA KYSRTSHIFV MVRDEGVGEV 600 KGGIVKYKLT KADEENLTTG LRRALRILVA AGAEEVGTYR SDGQRLKCGG VKEEDLEKFL 660 ETVDAPAGVV SMSRRWTHSF TAHQMGCCRM GATEEEGAVD GYGESWEAEG LYVCDASVLP 720 TALGVNPMVT IQSTAYCISK RLAALMMKNK KKQD* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK05249 | PRK05249 | 4.0e-6 | 246 | 277 | 32 | + soluble pyridine nucleotide transhydrogenase; Provisional | ||
| PRK06134 | PRK06134 | 8.0e-7 | 238 | 275 | 38 | + putative FAD-binding dehydrogenase; Reviewed | ||
| pfam05199 | GMC_oxred_C | 7.0e-22 | 607 | 738 | 132 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 6.0e-33 | 244 | 731 | 547 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 3.0e-83 | 292 | 511 | 223 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD10696.1 | 0 | 1 | 751 | 1 | 735 | Unknown protein [Arabidopsis thaliana] |
| GenBank | ACF22878.1 | 0 | 24 | 748 | 1 | 718 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 8 | 748 | 2 | 737 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_171895.2 | 0 | 1 | 751 | 1 | 757 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002529832.1 | 0 | 8 | 748 | 4 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.0001 | 674 | 735 | 438 | 494 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1coy_A | 0.0001 | 674 | 735 | 438 | 494 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1b8s_A | 0.0001 | 674 | 735 | 433 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
