| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra015497 |
| Family | GT20 |
| Protein Properties | Length: 375 Molecular Weight: 42912.1 Isoelectric Point: 4.454 |
| Chromosome | Chromosome/Scaffold: 10 Start: 1383261 End: 1385834 |
| Description | trehalose-6-phosphatase synthase S8 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 35 | 171 | 3.5e-32 |
| SSVSSDRMIIVANRLPLKSERRNDDGTWSFTWDQDSLYLHLKDDFLEDMEVLYVGSLSVDGDSHEQEHVAQMLLEKFKCVPTFFPPDLRSKYYDGFCKRQ LWPFFHYMLPFSRSNGGRFDRSVWEAYVAANKLFFQK | |||
| Full Sequence |
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| Protein Sequence Length: 375 Download |
| MGREGSKRLL PRVMTVPGNV SEFDDDDQAS SDNPSSVSSD RMIIVANRLP LKSERRNDDG 60 TWSFTWDQDS LYLHLKDDFL EDMEVLYVGS LSVDGDSHEQ EHVAQMLLEK FKCVPTFFPP 120 DLRSKYYDGF CKRQLWPFFH YMLPFSRSNG GRFDRSVWEA YVAANKLFFQ KNSINKAPSQ 180 EVMNFLDALC EDKKNSIFIV SERGRKSLGE WFSPCKNIGI VAEHGYFLKW PGSEEWETCG 240 QGTDFGWMQI VEPMMKQYTE STDGSSIEVK DSALVWQYRD VDLVKSGHYI VEVKPQEVSK 300 GYVSEKIFSS MSEEGKPVDF VLCIGDDRSD EDMQLPSKAK YYLDDTMEVR SMLESLAEAS 360 EASNFSMREL DDAL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14501 | PRK14501 | 2.0e-20 | 41 | 169 | 131 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| PRK14501 | PRK14501 | 8.0e-40 | 177 | 359 | 221 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| pfam02358 | Trehalose_PPase | 2.0e-51 | 171 | 347 | 224 | + Trehalose-phosphatase. This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. | ||
| PLN02205 | PLN02205 | 4.0e-55 | 8 | 168 | 166 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| PLN02205 | PLN02205 | 4.0e-64 | 173 | 361 | 238 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF00836.1 | 0 | 171 | 374 | 41 | 293 | putative trehalose-6-phosphate synthase [Arabidopsis thaliana] |
| EMBL | CBI22022.1 | 2e-20 | 1 | 77 | 20 | 96 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI22022.1 | 0 | 171 | 362 | 530 | 770 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_172129.1 | 0 | 1 | 171 | 20 | 188 | ATTPS7; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | NP_172129.1 | 0 | 171 | 374 | 599 | 851 | ATTPS7; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV053092 | 240 | 185 | 375 | 0 |
| EV036768 | 236 | 189 | 375 | 0 |
| FD578254 | 226 | 171 | 347 | 0 |
| FD940943 | 185 | 171 | 331 | 0 |
| DY007032 | 187 | 171 | 333 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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