| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra015504 |
| Family | GT48 |
| Protein Properties | Length: 1922 Molecular Weight: 223434 Isoelectric Point: 8.9003 |
| Chromosome | Chromosome/Scaffold: 10 Start: 1354743 End: 1365255 |
| Description | glucan synthase-like 7 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT48 | 1042 | 1771 | 0 |
| IPQSLEARRRMTFFANSLFMNMPDAPRVRDMLSFSVLTPYYKEDVLYSEEELNKENEDGISILFYLQRIYPEEWSNFSERVNDPKRIFSEKDKTDQLREW VSYRGQTLSRTVRGMMYYRMALELQCFQEYTEYAAHSGYLPSASYDEFMNRARALADLKFTYVVSCQVYGNQKKSSDGRDRSCYNNILQLMLKYPSLRVA YIDEREETINKKSQKVFYSVLLKGCNKLDEEIYRIKLPGNPTEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEETFKMRNVLQEFDEGRRGKRNPTI LGLREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRIFHITRGGISKASKIINLSEDIFAGYNSTLRGGYITHHEYIQAGKGRD VGMNQVSVFEAKVANGNGEQTLSRDVYRLGRRFDFYRMLSFYFTTVGFYFSSMITVLTVYVFLYGRLYLVLSGLEKEILQSAIVHQSKALEEALAAQSVF QLGFLMVLPMVMEIGLEKGFRKALGDFIIMQLQLASVFFTFQLGTKAHYFGRTILHGGSKYRATGRGFVVFHAKFADNYRLYSRSHFVKGLELVMLLIVY QVYGNSYRSSSLYIYITFSMWFLVTSWLFAPFIFNPSGFEWQKTVDDWTDWKRWMGNRGGIGILVEKSWESWWESEQEHLKHANLRGRVLEILLALRFLL YQYGIVYHLNVAHRDTTILVYGLSWGVLLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1922 Download |
| MASTSGGRGE DGRPPQMQPV RSLSRRMTRA GTMMIDHPNE DENVIDSELV PSSLASIAPV 60 LRVANEIEDQ NPRVAYLCRF HAFEKAHRMD PTSSGRGVRQ FKTYLLHKLE KEEPTSDPKE 120 IQNYYQRFYE ENIQKGEGRK TPEEMAKLYQ MASVLYDVLK TVVPPARIDE KTHRYAKEVE 180 RKKDHYEHYN ILPLDAGGAK TAIMELPEIK VAVRAVSNVE NLPRPKLHSS STNPDQVERE 240 ETRSFNDILE WLALVFGFQR GNVANQREHL ILLLANVDVR KRDLENYDEL KPSTVRKLMD 300 KYFKNYRSWC KYLRCESYLR FPPGCNEQQL SLVYIGLYLL IWGEASNIRF MPECFCYIFH 360 KMADEVHGIL FSNVYPVTGD TYEAGAPDDE AFLRNVITPI YQVLRKEVRR NKMGKASHSK 420 WRNYDDLNEY FWDKRCFRLG WPMKPEADFF IHSDEIAQHP NERRDQVPHG KRKPKTNFVE 480 ARTFWNLYRS FDRMWMFLVL SLQTMMIVAW SPSGSILAIF EEDVFFNVLT IFITSAFLNL 540 LQATLDVILS FGAWKSLKFS QILRFITKFL MAAMWAIILP IAYSKSVQNP TGLIKFFSSW 600 VQSWPHQTLY NYAIALYVSP NILAAVFFLL PPLRRIMERS NMRIVTLIMW WAQPKLYVGR 660 GMHEEMFALF KYTFFWVMLL LSKLAFSFYV EILPLVKPTK LIWDMSGVNY QWHEFFPNAT 720 HNIGVIISIW GPIVLVYFMD TQIWYAIFST IFGGIYGAFS HLGEIRTLGM LRSRFRFVPS 780 AFCSKLTPSP PGRAKRKHLD EQVDENDIAR FSQMWNKFIY TMRDEDLISD RERDLLLVPS 840 SSGDVTVVQW PPFLLASKIP IALDMAKDFK GKEDAELFKK IKSEYYMYYA VVEAYESMRD 900 VIYGLLEDES DKRIVREICF EIDDSIQQHR FLSAFRMTGM PLLSDKLEKF LKILLSDYGE 960 DETYKSQIIN VLQDIIEIIT QDVMVKGHEI LERAHYQSGD IENEKKEQRF EKINLGGQND 1020 SWREKVVRLL LLVTVKESAI NIPQSLEARR RMTFFANSLF MNMPDAPRVR DMLSFSVLTP 1080 YYKEDVLYSE EELNKENEDG ISILFYLQRI YPEEWSNFSE RVNDPKRIFS EKDKTDQLRE 1140 WVSYRGQTLS RTVRGMMYYR MALELQCFQE YTEYAAHSGY LPSASYDEFM NRARALADLK 1200 FTYVVSCQVY GNQKKSSDGR DRSCYNNILQ LMLKYPSLRV AYIDEREETI NKKSQKVFYS 1260 VLLKGCNKLD EEIYRIKLPG NPTEIGEGKP ENQNHAIIFT RGEALQTIDM NQDNYFEETF 1320 KMRNVLQEFD EGRRGKRNPT ILGLREHIFT GSVSSLAWFM SNQETSFVTI GQRVLANPLR 1380 VRFHYGHPDI FDRIFHITRG GISKASKIIN LSEDIFAGYN STLRGGYITH HEYIQAGKGR 1440 DVGMNQVSVF EAKVANGNGE QTLSRDVYRL GRRFDFYRML SFYFTTVGFY FSSMITVLTV 1500 YVFLYGRLYL VLSGLEKEIL QSAIVHQSKA LEEALAAQSV FQLGFLMVLP MVMEIGLEKG 1560 FRKALGDFII MQLQLASVFF TFQLGTKAHY FGRTILHGGS KYRATGRGFV VFHAKFADNY 1620 RLYSRSHFVK GLELVMLLIV YQVYGNSYRS SSLYIYITFS MWFLVTSWLF APFIFNPSGF 1680 EWQKTVDDWT DWKRWMGNRG GIGILVEKSW ESWWESEQEH LKHANLRGRV LEILLALRFL 1740 LYQYGIVYHL NVAHRDTTIL VYGLSWGVLL AVLLVLKMVS MGRRKFGTDF QVMFRILKAL 1800 LFLGFLSVMT VLFVVCGLTI ADVCASFLAF LPTGWAILLI GQALRGVLKG LGFWDSIKEL 1860 GRAYEYIMGL SIFTPIAVLS WFPFVSEFQT RLLFNQAFSR GLQISMILAG KKDKETPAPS 1920 K* 1980 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 1.0e-7 | 55 | 177 | 142 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 2.0e-54 | 329 | 444 | 117 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1042 | 1758 | 810 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF24822.1 | 0 | 1 | 1918 | 1 | 1928 | AC007592_15 F12K11.17 [Arabidopsis thaliana] |
| RefSeq | NP_172136.1 | 0 | 1 | 1918 | 1 | 1931 | ATGSL07 (glucan synthase-like 7); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_191469.2 | 0 | 21 | 1918 | 13 | 1932 | ATGSL11 (glucan synthase-like 11); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Swiss-Prot | Q9LYS6 | 0 | 21 | 1918 | 13 | 1919 | CALS6_ARATH RecName: Full=Putative callose synthase 6; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 11 |
| RefSeq | XP_002526651.1 | 0 | 1 | 1913 | 1 | 1902 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
