y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra015781 |
Family | AA1 |
Protein Properties | Length: 542 Molecular Weight: 59893.4 Isoelectric Point: 8.7601 |
Chromosome | Chromosome/Scaffold: 07 Start: 20885352 End: 20888203 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 46 | 496 | 0 |
QQGILINGQFPGPDIHSVTNDNLIINVYNSLDEPFLLSWNGVQQRRNSYVDGVYGTTCPIPPGKNYTYILQVKDQIGSFYYFPSLAFHKAAGGFGGLRIL SRPGIPVPFADPAGDYTVLIGDWYKSNHTDLKAQLDSGRKLPLPDGILINGRGSGATLNVEQGKTYRLRISNIGLQHSLNFRIQNHKMKVVEVEGTHTLQ TTFSSLDVHVGQSYSVLVTADQPAQDYYVVVSSRFTSDVLTTTGVLRYSGSAGGVSGPIPGGPTIQIDWSLNQARAIRTNLTASGPRPNPQGSYHYGMIN TTRTIRLASSAGQVNGKQRYAVNSVSFNPADTPLKLADYFKIDGVYRVGSIQSQPTGGGIYLDTSVMQTDYRTFIEIVFENSEDIVQSWHLDGYSFWVVG MDGGQWTPDSRNEYNLRDAVARCTVQVYPSSWTAIYIALDNVGMWNLRSEF |
Full Sequence |
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Protein Sequence Length: 542 Download |
MAANASFAAA LIVGFALLFA VTAESPYRFF EWNVTYGDIY PLGVRQQGIL INGQFPGPDI 60 HSVTNDNLII NVYNSLDEPF LLSWNGVQQR RNSYVDGVYG TTCPIPPGKN YTYILQVKDQ 120 IGSFYYFPSL AFHKAAGGFG GLRILSRPGI PVPFADPAGD YTVLIGDWYK SNHTDLKAQL 180 DSGRKLPLPD GILINGRGSG ATLNVEQGKT YRLRISNIGL QHSLNFRIQN HKMKVVEVEG 240 THTLQTTFSS LDVHVGQSYS VLVTADQPAQ DYYVVVSSRF TSDVLTTTGV LRYSGSAGGV 300 SGPIPGGPTI QIDWSLNQAR AIRTNLTASG PRPNPQGSYH YGMINTTRTI RLASSAGQVN 360 GKQRYAVNSV SFNPADTPLK LADYFKIDGV YRVGSIQSQP TGGGIYLDTS VMQTDYRTFI 420 EIVFENSEDI VQSWHLDGYS FWVVGMDGGQ WTPDSRNEYN LRDAVARCTV QVYPSSWTAI 480 YIALDNVGMW NLRSEFWARQ YLGQQFYLRV YTTSTSLRDE YPIPKNALLC GRASGRRTRP 540 L* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 10 | 541 | 534 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 11 | 538 | 532 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 4 | 538 | 538 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 1 | 535 | 544 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 12 | 534 | 535 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL09733.1 | 0 | 1 | 541 | 1 | 541 | At1g76160/T23E18_10 [Arabidopsis thaliana] |
GenBank | AAL24296.1 | 0 | 1 | 541 | 2 | 542 | Unknown protein [Arabidopsis thaliana] |
GenBank | AAM97070.1 | 0 | 1 | 541 | 1 | 541 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_177743.1 | 0 | 1 | 541 | 1 | 541 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002510630.1 | 0 | 1 | 541 | 5 | 546 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 531 | 4 | 539 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 1asq_A | 0 | 28 | 531 | 4 | 539 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 1asp_B | 0 | 28 | 531 | 4 | 539 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 1asp_A | 0 | 28 | 531 | 4 | 539 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 1aso_B | 0 | 28 | 531 | 4 | 539 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |