| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016161 |
| Family | GT14 |
| Protein Properties | Length: 399 Molecular Weight: 45117.6 Isoelectric Point: 7.8376 |
| Chromosome | Chromosome/Scaffold: 07 Start: 19117096 End: 19118670 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 50 | 306 | 0 |
| FAYYITGGCGDGDRIFRLLLAVYHPRNRYLLHLGAEATEAERLSLLSRLKTVPAVNAFGNVDVLGRVDRLSDNGASKTASTLHAVSILLKLGRSWNWFIE LSALDYPLITQDDLSHVFASVNRSINFIDHTSDLSWKESQRIKPIVVDPALYLARRTQLFTATEKRPTPDAFKVFTGSSPWIVLSRSFLEYCIFGWDNLP RTLLMYFNNVILSEECYFHTVICNAPEFSNTIVNGDLRYMIWDSPPKMEPHFLSVSD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 399 Download |
| MGAEKKWLFT LFSVVFLSAF LLLLLYSLSA FTSKPFPSPI RHGPHHPPAF AYYITGGCGD 60 GDRIFRLLLA VYHPRNRYLL HLGAEATEAE RLSLLSRLKT VPAVNAFGNV DVLGRVDRLS 120 DNGASKTAST LHAVSILLKL GRSWNWFIEL SALDYPLITQ DDLSHVFASV NRSINFIDHT 180 SDLSWKESQR IKPIVVDPAL YLARRTQLFT ATEKRPTPDA FKVFTGSSPW IVLSRSFLEY 240 CIFGWDNLPR TLLMYFNNVI LSEECYFHTV ICNAPEFSNT IVNGDLRYMI WDSPPKMEPH 300 FLSVSDYDQM AQSGAAFARQ FKKDDPVLDM VDRQILKRGR YRVTPGAWCA RSHSSWWTDP 360 CSEWGDVNVV KGGPQGKKLD ETVTNFLDDL SSETNQCK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 2.0e-68 | 50 | 311 | 266 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 3.0e-140 | 48 | 398 | 351 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_565009.1 | 0 | 32 | 398 | 31 | 395 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002284096.1 | 0 | 34 | 398 | 39 | 401 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311492.1 | 0 | 1 | 398 | 1 | 390 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315896.1 | 0 | 1 | 398 | 1 | 400 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531062.1 | 0 | 40 | 398 | 40 | 396 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000002 | 66 | 242 | 101 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000002 | 66 | 242 | 101 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000002 | 66 | 242 | 101 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000002 | 66 | 242 | 101 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0000005 | 66 | 242 | 101 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
