| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016192 |
| Family | GH9 |
| Protein Properties | Length: 500 Molecular Weight: 55278.9 Isoelectric Point: 9.5706 |
| Chromosome | Chromosome/Scaffold: 07 Start: 18955249 End: 18959047 |
| Description | glycosyl hydrolase 9B1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 35 | 489 | 0 |
| DYRDALRKSIMFFEGQRSGKLPPDQRLRWRRDSALRDGSSAGVDLSGGYYDAGDNVKFGFPMAFTTTMLSWSVIDFGRTMGPELKNAVGAVRWGTDYLLK ATAIPGVVFVQVGDAYSDHNCWERPEDMDTLRSVYKIDRAHPGSDVAGETAAALAAASIVFRKRDPAYSRRLLDRATRVFAFANRYRGAYSSSLYHAVCP FYCDFNGYQDELLWGAAWLHKASRKRVYREFIVKNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFESFKQNADEFICSILPGISHPQVQYSR GGLLVKTGGSNMQHVTSLSFLLLAYSNYLSHARKVVPCGELTASPSLLRQVAKRQVDYILGDNPLGMSYMVGYGQRFPRRIHHRGSSVPSVSAHPARIGC KEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFVQSEPTTYINAPLVGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 500 Download |
| MARKSLTSPE ISPATLSLVL LVVLLSSSAI HAGHDYRDAL RKSIMFFEGQ RSGKLPPDQR 60 LRWRRDSALR DGSSAGVDLS GGYYDAGDNV KFGFPMAFTT TMLSWSVIDF GRTMGPELKN 120 AVGAVRWGTD YLLKATAIPG VVFVQVGDAY SDHNCWERPE DMDTLRSVYK IDRAHPGSDV 180 AGETAAALAA ASIVFRKRDP AYSRRLLDRA TRVFAFANRY RGAYSSSLYH AVCPFYCDFN 240 GYQDELLWGA AWLHKASRKR VYREFIVKNE VVLRAGDTIN EFGWDNKHAG INVLISKEVL 300 MGKAEYFESF KQNADEFICS ILPGISHPQV QYSRGGLLVK TGGSNMQHVT SLSFLLLAYS 360 NYLSHARKVV PCGELTASPS LLRQVAKRQV DYILGDNPLG MSYMVGYGQR FPRRIHHRGS 420 SVPSVSAHPA RIGCKEGSRY FLSPNPNPNL LVGAVVGGPN VTDAFPDSRP YFVQSEPTTY 480 INAPLVGLLG YFSTHSSWR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02308 | PLN02308 | 0 | 30 | 499 | 470 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 32 | 497 | 466 | + endoglucanase | ||
| PLN03009 | PLN03009 | 0 | 32 | 497 | 469 | + cellulase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 35 | 490 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN02613 | PLN02613 | 0 | 35 | 487 | 457 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA67156.1 | 0 | 34 | 499 | 27 | 493 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| EMBL | CAA67157.1 | 0 | 1 | 499 | 1 | 492 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_173735.1 | 0 | 1 | 495 | 1 | 488 | AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177228.1 | 0 | 34 | 499 | 27 | 492 | ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002527779.1 | 0 | 8 | 496 | 2 | 492 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 34 | 489 | 3 | 425 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1ksc_A | 0 | 34 | 489 | 3 | 425 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1ks8_A | 0 | 34 | 489 | 3 | 425 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 35 | 483 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 35 | 483 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
