y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra016276 |
Family | GH1 |
Protein Properties | Length: 502 Molecular Weight: 57021.6 Isoelectric Point: 7.2562 |
Chromosome | Chromosome/Scaffold: 08 Start: 17658899 End: 17662573 |
Description | beta glucosidase 40 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 26 | 499 | 0 |
GSFPKGFVFGTASSAFQHEGAVKEDGRGPTIWDTFSHTFGKITDFSNADVAVDQYHRYEEDVQLMKNMGMDAYRFSISWARIFPNGVGQINEAGIDHYNK LINALLAKGIEPYVTLYHWDLPQALHDRYLGWLNPQIINDFAAYAEVCFQRFGDRVKHWITFNEPHTFSIQGYDVGLQAPGRCSILFKLTCRSGNSSTEP YIVGHNVILTHATVSDIYRKKYKATQGGSLGIAFDVMWYEPESNNREDMEAAQRAQDFQLGWFLDPLMFGDYPSSMRSRVGSRLPVLTGSQSNLIKGSLD FVGINHYTTYYARNNATNLIGTLLHDAISDSGTVTLPFKGLSAIGDRASSIWLYIVPRGMRSLMNYVKHRYGNPPVYITENGMDDSNSILIPRKETLKDA KRIRYHHDYLSSLQAAIKEDGCNVKGYFVWSLLDNWEWAAGYSSRFGLYFVDYRDKLKRYPKDSVHWFTSFLNS |
Full Sequence |
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Protein Sequence Length: 502 Download |
MLTMTIIMMM VTMDKTCICA EEISRGSFPK GFVFGTASSA FQHEGAVKED GRGPTIWDTF 60 SHTFGKITDF SNADVAVDQY HRYEEDVQLM KNMGMDAYRF SISWARIFPN GVGQINEAGI 120 DHYNKLINAL LAKGIEPYVT LYHWDLPQAL HDRYLGWLNP QIINDFAAYA EVCFQRFGDR 180 VKHWITFNEP HTFSIQGYDV GLQAPGRCSI LFKLTCRSGN SSTEPYIVGH NVILTHATVS 240 DIYRKKYKAT QGGSLGIAFD VMWYEPESNN REDMEAAQRA QDFQLGWFLD PLMFGDYPSS 300 MRSRVGSRLP VLTGSQSNLI KGSLDFVGIN HYTTYYARNN ATNLIGTLLH DAISDSGTVT 360 LPFKGLSAIG DRASSIWLYI VPRGMRSLMN YVKHRYGNPP VYITENGMDD SNSILIPRKE 420 TLKDAKRIRY HHDYLSSLQA AIKEDGCNVK GYFVWSLLDN WEWAAGYSSR FGLYFVDYRD 480 KLKRYPKDSV HWFTSFLNST S* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 4.0e-155 | 16 | 500 | 486 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-163 | 24 | 500 | 479 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 8.0e-164 | 19 | 501 | 488 | + beta-glucosidase | ||
TIGR03356 | BGL | 2.0e-169 | 29 | 493 | 468 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 24 | 500 | 480 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM61600.1 | 0 | 14 | 501 | 12 | 498 | beta-glucosidase, putative [Arabidopsis thaliana] |
EMBL | CBI27264.1 | 0 | 4 | 499 | 70 | 564 | unnamed protein product [Vitis vinifera] |
EMBL | CBI27265.1 | 0 | 1 | 499 | 29 | 525 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_173978.1 | 0 | 14 | 501 | 24 | 510 | BGLU40 (BETA GLUCOSIDASE 40); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002512097.1 | 0 | 15 | 500 | 20 | 504 | beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 23 | 499 | 12 | 488 | A Chain A, Lip5(mit)2 |
PDB | 3gnp_A | 0 | 23 | 499 | 12 | 488 | A Chain A, Lip5(mit)2 |
PDB | 3gno_A | 0 | 23 | 499 | 12 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_B | 0 | 23 | 497 | 29 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_A | 0 | 23 | 497 | 29 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |