| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016328 |
| Family | GT20 |
| Protein Properties | Length: 869 Molecular Weight: 98652.8 Isoelectric Point: 6.1986 |
| Chromosome | Chromosome/Scaffold: 08 Start: 17910360 End: 17913311 |
| Description | trehalose-phosphatase/synthase 9 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 51 | 545 | 0 |
| NSSTGSHERKIIVANMLPLQAKKDAETGQWCFTWDEDSLLIQLRDGFPSDTEFVYIGSLNADIAINEQEAVSQKLLSEFNCVPTFLPKEIQEKYYRGFCK HHLWPLFHYMLPMFPDHGDRFDRRLWQAYVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDDILRG LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPIGIHIGRLESVLNLPSTAAKMKEIQEQFKGKKLILGIDDMDIFKGISL KLIAMEHLFETYWHMRGKCVLIQIVNPARASGKDVEEAKREIYVTAKRINERYGSPGYEPVILIDRLVPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYI ICRQGTPGIDKAMGTSRDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDVDAVAEAVNLALKMSEAEKRLRHEKHYHYVSTHDVGYWAKSFLQDLER | |||
| Full Sequence |
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| Protein Sequence Length: 869 Download |
| MVSRSCANFL DLSSWDLLDF PQTQTQRALP RVMTVPGIVS ELEGDGSSDV NSSTGSHERK 60 IIVANMLPLQ AKKDAETGQW CFTWDEDSLL IQLRDGFPSD TEFVYIGSLN ADIAINEQEA 120 VSQKLLSEFN CVPTFLPKEI QEKYYRGFCK HHLWPLFHYM LPMFPDHGDR FDRRLWQAYV 180 SANKIFSDRV MEVINPEDDY VWIQDYHLMV LPTFLRKRFN RIKLGFFLHS PFPSSEIYRT 240 LPVRDDILRG LLNCDLIGFH TFDYARHFLS CCSRMLGLDY ESKRGHIGLD YFGRTVFIKI 300 LPIGIHIGRL ESVLNLPSTA AKMKEIQEQF KGKKLILGID DMDIFKGISL KLIAMEHLFE 360 TYWHMRGKCV LIQIVNPARA SGKDVEEAKR EIYVTAKRIN ERYGSPGYEP VILIDRLVPR 420 YEKTAYYAMA DCCLVNAVRD GMNLVPYKYI ICRQGTPGID KAMGTSRDSP RTSMLVVSEF 480 IGCSPSLSGA IRVNPWDVDA VAEAVNLALK MSEAEKRLRH EKHYHYVSTH DVGYWAKSFL 540 QDLERASQDH YNKRCWGIGF GLSFRVLSLS PSFRKLSIDH IVSTYRKTER RAIFLDYDGT 600 LVPESSLVKT PTAEVLSVLK SLCEDPKNTV FIVSGRGWES LSEWLSPCEN LGIAAEHGYF 660 IRWSSKKEWE TCYSSAEAEW KNIVEPVMRS YMDATDGSTI EFKESALVWH HQDADPDFGS 720 CQAKELLDHL ESVLANEPVV VKRGQHIVEV KPQGVSKGLA VEKVIHRMVE DGNSPDMVMC 780 IGDDRSDEDM FESILNTVTN PDLPMRPEIF ACTVGRKPSK AKYFLDDVTD VLKLLEGLGA 840 ASSSSKPEYG QESSSSSSQT HVAFESII* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 7.0e-167 | 49 | 831 | 816 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 831 | 839 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 58 | 545 | 492 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 59 | 831 | 780 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 61 | 544 | 484 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC18810.1 | 0 | 33 | 868 | 1 | 826 | Strong similarity to trehalose-6-phosphate synthase homolog from A. thaliana chromosome 4 contig gb |
| GenBank | AAV65495.1 | 0 | 1 | 847 | 1 | 847 | trehalose 6-phosphate synthase [Gossypium hirsutum] |
| RefSeq | NP_173799.1 | 0 | 1 | 868 | 1 | 867 | ATTPS9; transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | NP_177186.2 | 0 | 1 | 868 | 1 | 856 | ATTPS8; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | XP_002521023.1 | 0 | 1 | 868 | 1 | 861 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 0 | 142 | 545 | 73 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 0 | 142 | 545 | 73 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 0 | 142 | 545 | 73 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 0 | 142 | 545 | 73 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 2wtx_D | 0 | 142 | 545 | 74 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 767 | 69 | 831 | 0 |
| HO779327 | 514 | 99 | 612 | 0 |
| HO779327 | 223 | 609 | 831 | 0 |
| HO797286 | 456 | 376 | 831 | 0 |
| ES902788 | 292 | 29 | 320 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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