| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016475 |
| Family | CE16 |
| Protein Properties | Length: 380 Molecular Weight: 41424.7 Isoelectric Point: 7.5846 |
| Chromosome | Chromosome/Scaffold: 08 Start: 18645003 End: 18646948 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 137 | 368 | 3.5e-23 |
| FASGGSGYIPMTPTYLNVIPMLHQLTYFQHYIARVKKLVGQEKGDQIITNGLAIVFAGSNDMGITYYGPGAQWVKDDIYSFTSNMVESATSFAMQLYGYG ARHIGVAGMTPLGCIPAQRTLKGGPHRKCAQDVNYAVQIFNTKLSIALDHLAKTLPDSKLVFMDIYSPFSQILENPADYGFEVINRGCCGTGLVETGPLC NQETSTVCRNISAYLYWDSFHPSQRLYEILTK | |||
| Full Sequence |
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| Protein Sequence Length: 380 Download |
| MPPPPPPGPS SKPCPPQGTY KFPPAPQPVP SLAPCTCPCP SDPSPRQEPP KNVTVPALFV 60 FGDSLVDTGN NNNVSTPLRC NFRPYGIDFL QGVPTGRYSD GKVPSDFLAE YLGIKSIVPA 120 YMDPKLQPDD LLTGVCFASG GSGYIPMTPT YLNVIPMLHQ LTYFQHYIAR VKKLVGQEKG 180 DQIITNGLAI VFAGSNDMGI TYYGPGAQWV KDDIYSFTSN MVESATSFAM QLYGYGARHI 240 GVAGMTPLGC IPAQRTLKGG PHRKCAQDVN YAVQIFNTKL SIALDHLAKT LPDSKLVFMD 300 IYSPFSQILE NPADYGFEVI NRGCCGTGLV ETGPLCNQET STVCRNISAY LYWDSFHPSQ 360 RLYEILTKIL VKKYIPLLF* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd01847 | Triacylglycerol_lipase_like | 8.0e-11 | 57 | 366 | 328 | + Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions. | ||
| COG3240 | COG3240 | 4.0e-15 | 48 | 366 | 337 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
| cd01846 | fatty_acyltransferase_like | 4.0e-33 | 58 | 366 | 311 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 8.0e-101 | 55 | 378 | 324 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 9.0e-129 | 56 | 374 | 319 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64323.1 | 0 | 24 | 372 | 45 | 393 | anter-specific proline-rich protein APG precursor, putative [Arabidopsis thaliana] |
| EMBL | CAA42925.1 | 0 | 51 | 378 | 198 | 532 | APG [Arabidopsis thaliana] |
| RefSeq | NP_001117317.1 | 0 | 52 | 375 | 56 | 379 | hydrolase, acting on ester bonds / lipase [Arabidopsis thaliana] |
| RefSeq | NP_173441.2 | 0 | 51 | 378 | 198 | 532 | hydrolase, acting on ester bonds / lipase/ structural constituent of cell wall [Arabidopsis thaliana] |
| RefSeq | NP_564104.1 | 0 | 24 | 372 | 45 | 393 | family II extracellular lipase, putative [Arabidopsis thaliana] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX050554 | 252 | 129 | 380 | 0 |
| EV531833 | 259 | 122 | 380 | 0 |
| EX055188 | 236 | 54 | 289 | 0 |
| EW727240 | 242 | 139 | 380 | 0 |
| EW726949 | 241 | 140 | 380 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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