| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016568 |
| Family | AA1 |
| Protein Properties | Length: 573 Molecular Weight: 64409.4 Isoelectric Point: 9.1545 |
| Chromosome | Chromosome/Scaffold: 08 Start: 19097184 End: 19100135 |
| Description | laccase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 20 | 559 | 0 |
| TTRRFHFNVEWKKVTRLCHTKQLLTVNGQYPGPAVVVNEGDTVEIKVTNRIAHNTTIHWHGLRQYRSGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTL LWHAHHSWQRASVYGAFIIYPRQPYPFSGSHIQSEIPIILGEWWNDDVDKVEKQMLKTGAGAKVSDAYTLNGLPGPLYPCSTKDTFTANVEAGKTYILRI INAALNNELFFAISNHTLTVVEVDAVYTKPVHTKAIMIAPGQTTTLLLRTNHLSDGEFLIAATPYVTSVFPFNNSTAVGFLRYNNKSKPVNHPNRRRLIT SLSTRAVLPDMLDTKFATRFSDSIKSLGSAEYPCKVPTTIDKRVITTISLNLQNCPENQTCSGYDGKRFFASMNNVSFIRPPISILESYYKKQSKGVFTL DFPEKPPSRFDFTGVDPVSENMNTEFGTKLFEVDFGARLEIVFQGTSFLNIENHPLHVHGHNFFVVGRGFGNFDVEKDPEKYNLVDPPERNTIAVPTGGW AAIRINADNPGVWFIHCHLEQHTSWGLAMGFIVKDGPLPS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 573 Download |
| MISTFLVLFA TLLPYSSAST TRRFHFNVEW KKVTRLCHTK QLLTVNGQYP GPAVVVNEGD 60 TVEIKVTNRI AHNTTIHWHG LRQYRSGWAD GPAYITQCPI RSKQSYTYRF KVEDQRGTLL 120 WHAHHSWQRA SVYGAFIIYP RQPYPFSGSH IQSEIPIILG EWWNDDVDKV EKQMLKTGAG 180 AKVSDAYTLN GLPGPLYPCS TKDTFTANVE AGKTYILRII NAALNNELFF AISNHTLTVV 240 EVDAVYTKPV HTKAIMIAPG QTTTLLLRTN HLSDGEFLIA ATPYVTSVFP FNNSTAVGFL 300 RYNNKSKPVN HPNRRRLITS LSTRAVLPDM LDTKFATRFS DSIKSLGSAE YPCKVPTTID 360 KRVITTISLN LQNCPENQTC SGYDGKRFFA SMNNVSFIRP PISILESYYK KQSKGVFTLD 420 FPEKPPSRFD FTGVDPVSEN MNTEFGTKLF EVDFGARLEI VFQGTSFLNI ENHPLHVHGH 480 NFFVVGRGFG NFDVEKDPEK YNLVDPPERN TIAVPTGGWA AIRINADNPG VWFIHCHLEQ 540 HTSWGLAMGF IVKDGPLPSQ TLLRPPRDLP KC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 1.0e-53 | 27 | 143 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 4.0e-63 | 1 | 562 | 603 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 6.0e-70 | 4 | 559 | 587 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-78 | 21 | 562 | 577 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 21 | 572 | 554 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF78389.1 | 0 | 28 | 572 | 30 | 576 | AC069551_22 T10O22.11 [Arabidopsis thaliana] |
| RefSeq | NP_173252.2 | 0 | 1 | 572 | 8 | 581 | LAC1 (Laccase 1); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002281603.1 | 0 | 6 | 572 | 16 | 583 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002317883.1 | 0 | 6 | 572 | 15 | 579 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322091.1 | 0 | 14 | 572 | 23 | 579 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 19 | 562 | 1 | 536 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asq_A | 0 | 19 | 562 | 1 | 536 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_B | 0 | 19 | 562 | 1 | 536 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_A | 0 | 19 | 562 | 1 | 536 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1aso_B | 0 | 19 | 562 | 1 | 536 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
