| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016676 |
| Family | GH1 |
| Protein Properties | Length: 539 Molecular Weight: 61731 Isoelectric Point: 8.5774 |
| Chromosome | Chromosome/Scaffold: 08 Start: 19520987 End: 19523680 |
| Description | thioglucoside glucohydrolase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 43 | 510 | 0 |
| KGFPKDFIFGVSSAAYQACGRGRGLNIWDGFTHRYPEKGGSDLGNGDTTCESYTMWQKDIDIMDEMNATGYRFSFAWSRIIPKGKVSRGVNKGGLEYYHR LIDGLIAKNITPFVTLYHWDLPQTLQDEYDGFLNRQVIEDFRDFADLCFKEFGGKVKNWLTINQLYSVPTRGYSTGADAPGRCSPKVDARCYGGNSSTEP YIVAHNQLLAHAAVQFQRGRIGPVMITRWFLPFDETNKASIDAAERMKEFFLGWYMEPLTRGRYPDIMRRMVGNRLPNFTEAEARLVAGSYDFLGLNYYA TQYVQPTPNPLPVTSERYTAMMDPGTRLTFVNSRGEKTGPLFEELKGENSYYYPKGIYYVMDYFKTKYRNPLIYITENGFSTSGDQTRQEAVADSKRIDY LCSHLCFLRKVIMEKRVNIKGYFAWALGDNYEFGKGFTVRFGLSYVNWTDVSDRNLKDSGKWYQRFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 539 Download |
| MKFRGLDLIV FLLAVVSCKA NKEITCEENE PFTCNNTDRL NSKGFPKDFI FGVSSAAYQA 60 CGRGRGLNIW DGFTHRYPEK GGSDLGNGDT TCESYTMWQK DIDIMDEMNA TGYRFSFAWS 120 RIIPKGKVSR GVNKGGLEYY HRLIDGLIAK NITPFVTLYH WDLPQTLQDE YDGFLNRQVI 180 EDFRDFADLC FKEFGGKVKN WLTINQLYSV PTRGYSTGAD APGRCSPKVD ARCYGGNSST 240 EPYIVAHNQL LAHAAVQFQR GRIGPVMITR WFLPFDETNK ASIDAAERMK EFFLGWYMEP 300 LTRGRYPDIM RRMVGNRLPN FTEAEARLVA GSYDFLGLNY YATQYVQPTP NPLPVTSERY 360 TAMMDPGTRL TFVNSRGEKT GPLFEELKGE NSYYYPKGIY YVMDYFKTKY RNPLIYITEN 420 GFSTSGDQTR QEAVADSKRI DYLCSHLCFL RKVIMEKRVN IKGYFAWALG DNYEFGKGFT 480 VRFGLSYVNW TDVSDRNLKD SGKWYQRFIN VTTKITAHQD FLRSGLSFEN KMKTLTDA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 3.0e-103 | 45 | 519 | 494 | + beta-glucosidase | ||
| COG2723 | BglB | 1.0e-111 | 43 | 509 | 485 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN02814 | PLN02814 | 5.0e-114 | 37 | 520 | 501 | + beta-glucosidase | ||
| TIGR03356 | BGL | 5.0e-121 | 46 | 505 | 473 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 0 | 41 | 510 | 482 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX68547.1 | 0 | 9 | 521 | 9 | 531 | myrosinase [Brassica rapa var. parachinensis] |
| GenBank | ABS30827.1 | 0 | 17 | 538 | 17 | 546 | myrosinase [Brassica oleracea] |
| DDBJ | BAE16356.1 | 0 | 1 | 538 | 1 | 545 | myrosinase [Eutrema wasabi] |
| EMBL | CAA11412.1 | 0 | 9 | 521 | 9 | 531 | myrosinase, thioglucoside glucohydrolase [Brassica juncea] |
| EMBL | CAA55685.1 | 0 | 1 | 538 | 1 | 547 | myrosinase [Brassica napus] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1myr_A | 0 | 21 | 510 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 2wxd_M | 0 | 21 | 510 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9d_M | 0 | 21 | 510 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9b_M | 0 | 21 | 510 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1e73_M | 0 | 21 | 510 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| glucosinolate breakdown | RXN-8134 | EC-3.2.1.147 | thioglucosidase |
| glucosinolate breakdown (via thiocyanate-forming protein) | RXN-12024 | EC-3.2.1.147 | thioglucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
