| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016807 |
| Family | GT76 |
| Protein Properties | Length: 500 Molecular Weight: 56333.8 Isoelectric Point: 9.1724 |
| Chromosome | Chromosome/Scaffold: 08 Start: 20073289 End: 20075398 |
| Description | transferases, transferring hexosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT76 | 18 | 499 | 0 |
| IKYAVVSRLLVLFLTVLWRSFLQPYDTSAALNPPCLHHRDVPEDSPQLLVPNSVSKTLENSVVWDSVYFLRITQCGYEYEQTYAFLPLLPFFISLLSRTV LAPLVPLIGLRAVMVLSGYVVTNLAFVFAAIYLFRVSVIILKDTEASFRASVIFCFNPASIFYSSIYSESLYALFSIGGVYHLLSGASNVAVLWFALSGC ARSNGILNAGYICFQTMHRAYEAFYLKKRVCLSVQVLVTGFIRCVCICLPFVAFQAYGYYNICHGHKLDDVLRPWCKAKVPLLYNFIQSHYWGVGFLRYF QFIQLPNFLLASPILSLAVCSIVSYMKTRPELFTSLGFQATEKEKRSSARLYSLKEVLEPDVITSSNEGSRDIRQRKPSRKKDVTITTNTAAESNSPEAS GYFSADVFPFVVHLGLMAATAFFIMHVQVATRFLSASPPLYWFASHLIASPKHSKWGYLMWSYCAAYILLGSLLFSNFYPFT | |||
| Full Sequence |
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| Protein Sequence Length: 500 Download |
| MPRAMESSSK SRKESILIKY AVVSRLLVLF LTVLWRSFLQ PYDTSAALNP PCLHHRDVPE 60 DSPQLLVPNS VSKTLENSVV WDSVYFLRIT QCGYEYEQTY AFLPLLPFFI SLLSRTVLAP 120 LVPLIGLRAV MVLSGYVVTN LAFVFAAIYL FRVSVIILKD TEASFRASVI FCFNPASIFY 180 SSIYSESLYA LFSIGGVYHL LSGASNVAVL WFALSGCARS NGILNAGYIC FQTMHRAYEA 240 FYLKKRVCLS VQVLVTGFIR CVCICLPFVA FQAYGYYNIC HGHKLDDVLR PWCKAKVPLL 300 YNFIQSHYWG VGFLRYFQFI QLPNFLLASP ILSLAVCSIV SYMKTRPELF TSLGFQATEK 360 EKRSSARLYS LKEVLEPDVI TSSNEGSRDI RQRKPSRKKD VTITTNTAAE SNSPEASGYF 420 SADVFPFVVH LGLMAATAFF IMHVQVATRF LSASPPLYWF ASHLIASPKH SKWGYLMWSY 480 CAAYILLGSL LFSNFYPFT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5542 | COG5542 | 1.0e-16 | 125 | 332 | 213 | + Predicted integral membrane protein [Function unknown] | ||
| pfam04188 | Mannosyl_trans2 | 9.0e-20 | 427 | 499 | 83 | + Mannosyltransferase (PIG-V)). This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. | ||
| pfam04188 | Mannosyl_trans2 | 4.0e-122 | 11 | 365 | 356 | + Mannosyltransferase (PIG-V)). This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005789 | endoplasmic reticulum membrane |
| GO:0006506 | GPI anchor biosynthetic process |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC17633.1 | 0 | 1 | 499 | 1 | 492 | Contains similarity to hypothetical protein C18b11.05 gb |
| RefSeq | NP_172652.2 | 0 | 1 | 499 | 1 | 489 | transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002283435.1 | 0 | 10 | 499 | 8 | 497 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304011.1 | 0 | 1 | 499 | 1 | 483 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527781.1 | 0 | 8 | 499 | 3 | 500 | conserved hypothetical protein [Ricinus communis] |
