| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016970 |
| Family | GH9 |
| Protein Properties | Length: 567 Molecular Weight: 63345.6 Isoelectric Point: 8.1969 |
| Chromosome | Chromosome/Scaffold: 04 Start: 17334734 End: 17337077 |
| Description | glycosyl hydrolase 9A3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 78 | 531 | 0 |
| YNMALHTGLKFFNSQRSGRLPDQNNITWRGDSCIQDGKYPGSSHPNLSGGYYDGGDAIKSNFKMSFAMTMLSWSVIEYHAKYQQLGELSHVEGIIKWGTD YFLKTFDSSAADSIHDMVSQVGSEGTERYCWMRPEDIDYERKVHICISECPNLAAEMAAALASASIVFSENDAYSQKLIQGAKILYRFAESSIKGSGRSA RSSWDELLWGGVWLYYATGDATYLDRVTTLALADPSDSFSRDSGVFSWNTKLAGAQLLLTRMRLFLSPGYPAEEVLRKFHNQISIVMCSYLPSFNKFNRT KGGLIQLNNGDPQPLQYAANAAFLAALYGDYLEASDTRGWSCGPNVYFTNVLRDFSRSQVDYILGKNPENISYVVGYGERYPKHVHHRGASIPKNRKESC KGGWKWRESSKENPNVIEGAMVAGPDGHDVFHDVRTANYTEPTLTGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 567 Download |
| MRREVELQEV DWTAFPKPSE EMQSSWLLQH SPKPKKKTVR KRTCAWTLAF IGVVIAFSMT 60 VRALTHRHHY QQQAPGAYNM ALHTGLKFFN SQRSGRLPDQ NNITWRGDSC IQDGKYPGSS 120 HPNLSGGYYD GGDAIKSNFK MSFAMTMLSW SVIEYHAKYQ QLGELSHVEG IIKWGTDYFL 180 KTFDSSAADS IHDMVSQVGS EGTERYCWMR PEDIDYERKV HICISECPNL AAEMAAALAS 240 ASIVFSENDA YSQKLIQGAK ILYRFAESSI KGSGRSARSS WDELLWGGVW LYYATGDATY 300 LDRVTTLALA DPSDSFSRDS GVFSWNTKLA GAQLLLTRMR LFLSPGYPAE EVLRKFHNQI 360 SIVMCSYLPS FNKFNRTKGG LIQLNNGDPQ PLQYAANAAF LAALYGDYLE ASDTRGWSCG 420 PNVYFTNVLR DFSRSQVDYI LGKNPENISY VVGYGERYPK HVHHRGASIP KNRKESCKGG 480 WKWRESSKEN PNVIEGAMVA GPDGHDVFHD VRTANYTEPT LTGNAGLVAA LVALSGEKHM 540 LDKNRMFSGV PPLFPDVPPP PAPWTP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 4.0e-89 | 78 | 519 | 468 | + endoglucanase | ||
| PLN00119 | PLN00119 | 6.0e-92 | 44 | 513 | 495 | + endoglucanase | ||
| PLN02613 | PLN02613 | 9.0e-93 | 45 | 519 | 492 | + endoglucanase | ||
| PLN02345 | PLN02345 | 6.0e-108 | 81 | 513 | 452 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 1.0e-123 | 78 | 519 | 457 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK59818.1 | 0 | 3 | 550 | 24 | 605 | AT5g49720/K2I5_8 [Arabidopsis thaliana] |
| DDBJ | BAC22690.1 | 0 | 3 | 550 | 26 | 605 | endo-1,4-beta-D-glucanase [Pyrus communis] |
| EMBL | CAB51903.1 | 0 | 3 | 550 | 24 | 605 | cellulase; endo-1,4-beta-D-glucanase [Brassica napus] |
| RefSeq | NP_194157.1 | 0 | 3 | 553 | 24 | 607 | ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_199783.1 | 0 | 3 | 550 | 24 | 605 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 78 | 534 | 5 | 428 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ksc_A | 0 | 78 | 534 | 5 | 428 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ks8_A | 0 | 78 | 534 | 5 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 71 | 534 | 17 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 78 | 563 | 6 | 458 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
