| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra017025 |
| Family | GT4 |
| Protein Properties | Length: 565 Molecular Weight: 63262.1 Isoelectric Point: 7.5382 |
| Chromosome | Chromosome/Scaffold: 04 Start: 17050681 End: 17054876 |
| Description | phosphatase 2C5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT4 | 388 | 525 | 1.8e-21 |
| VLRSLKKLDRDVPRPKLQFVGSCRNESDEERLQKLKARAVELKLDGDVEFYKNAMYRELVALLGNADAGMHGMIDEHFGISVVEYMAAGAIPIAHNSAGP KMDIVLEEEGQRTGFLAETVEEYAEAIVEIVKMKETER | |||
| Full Sequence |
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| Protein Sequence Length: 565 Download |
| MQLSKDQETP PSPPRSPPPK LSTVACPSRK PRERTSSPFS EVLRRKRPPM LNRELFPQAP 60 PWSKEAVKTP PYEDVEAEKD GVYSVYCKRG RRRWMAMEDR YSAVVDHDGG GRRKAFFGVY 120 DGHGGSNAAE FAAKNLGNNI EAAVAAARSG EDGYSIERAI REAYLKTDEE FLKEGSGGGA 180 CCVTALISNG ELAVSNAGDC RAVISRAGVA EALTTDHSPN QENELIRIRA SGGYVDCHHG 240 VWRIQWTLAV SRAIGDEYLK KWVIAEPETR TLKIKPELEF LILASDGLWD NVTNQEAVDV 300 VRPYCIGVEN PTTLPACKKL AELSSTRGSL DDISVIIIQL KHHLAMVNSS WTKSHIEAIW 360 RIPERIRRHF LLKYQQILQF SYLLLSFVLR SLKKLDRDVP RPKLQFVGSC RNESDEERLQ 420 KLKARAVELK LDGDVEFYKN AMYRELVALL GNADAGMHGM IDEHFGISVV EYMAAGAIPI 480 AHNSAGPKMD IVLEEEGQRT GFLAETVEEY AEAIVEIVKM KETERLKMAE SARKRATRFS 540 EQRFSEDFKT AIRPVFTSDL KSQY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00481 | PP2C | 8.0e-61 | 83 | 333 | 263 | + Protein phosphatase 2C. Protein phosphatase 2C is a Mn++ or Mg++ dependent protein serine/threonine phosphatase. | ||
| cd03806 | GT1_ALG11_like | 3.0e-63 | 343 | 547 | 231 | + This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. | ||
| smart00332 | PP2Cc | 6.0e-76 | 82 | 338 | 260 | + Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. | ||
| cd00143 | PP2Cc | 1.0e-83 | 82 | 340 | 265 | + Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. | ||
| PLN02949 | PLN02949 | 4.0e-103 | 343 | 558 | 239 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE99716.1 | 0 | 343 | 561 | 10 | 251 | hypothetical protein [Arabidopsis thaliana] |
| EMBL | CAN71723.1 | 0 | 35 | 344 | 16 | 316 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_181547.1 | 0 | 20 | 344 | 62 | 389 | ATHPP2C5; catalytic/ protein serine/threonine phosphatase [Arabidopsis thaliana] |
| RefSeq | NP_181548.2 | 0 | 343 | 561 | 222 | 463 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002276936.1 | 0 | 42 | 344 | 87 | 381 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3kdj_B | 6e-34 | 116 | 341 | 54 | 305 | B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And A |
| PDB | 3nmn_D | 2e-33 | 116 | 341 | 57 | 308 | B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 |
| PDB | 3nmn_B | 2e-33 | 116 | 341 | 57 | 308 | B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 |
| PDB | 3jrq_A | 3e-33 | 116 | 341 | 69 | 320 | B Chain B, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With A |
| PDB | 3ujl_B | 2e-32 | 116 | 341 | 61 | 313 | A Chain A, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex With Type 2c Protein Phosphatase Abi2 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX051656 | 263 | 1 | 263 | 0 |
| EE516519 | 196 | 1 | 196 | 0 |
| DK517383 | 215 | 130 | 344 | 0 |
| DK571621 | 217 | 128 | 344 | 0 |
| EX051656 | 46 | 264 | 309 | 0.0002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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