| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra017120 |
| Family | AA2 |
| Protein Properties | Length: 351 Molecular Weight: 37923.2 Isoelectric Point: 7.2648 |
| Chromosome | Chromosome/Scaffold: 04 Start: 16514768 End: 16516392 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 54 | 315 | 0 |
| ELGSDPRIAASLLRLHFHDCFVNGCDASVLLDNSTSFRSEKDAAPNANSARGFDVVDRMKAEIEEVCPGTVSCADVLAIAAQISVLLSGGPWWPVSLGRR DGSQAFFDLSNTALPSPFATLAELKTVFRDAGLNRTSDLVALSGAHTFGRAQCIVITPRLYNFNGTNKPDPSINPTFLTQLRKLCPENGNPTVLANFDLA TPNRFDSHYYTNLRQGKGVIQSDQELFSTPGADTIPLVELYSKNTFEFFKAFAKSMVRMGKL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 351 Download |
| MGVSRSISCS ALGALILGCL LLQASNSNAQ LRPDFYFRTC PGVFLIVGKV IVEELGSDPR 60 IAASLLRLHF HDCFVNGCDA SVLLDNSTSF RSEKDAAPNA NSARGFDVVD RMKAEIEEVC 120 PGTVSCADVL AIAAQISVLL SGGPWWPVSL GRRDGSQAFF DLSNTALPSP FATLAELKTV 180 FRDAGLNRTS DLVALSGAHT FGRAQCIVIT PRLYNFNGTN KPDPSINPTF LTQLRKLCPE 240 NGNPTVLANF DLATPNRFDS HYYTNLRQGK GVIQSDQELF STPGADTIPL VELYSKNTFE 300 FFKAFAKSMV RMGKLKPLTG TQGEVRLNCR VVNSRTRGVE TEDDGVVSSI * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00314 | plant_peroxidase_like | 4.0e-31 | 51 | 314 | 293 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 1.0e-61 | 47 | 200 | 154 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 2.0e-85 | 32 | 333 | 308 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 1.0e-164 | 30 | 332 | 305 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAA32842.1 | 0 | 1 | 350 | 1 | 349 | peroxidase [Arabidopsis thaliana] |
| EMBL | CAG77504.1 | 0 | 67 | 350 | 1 | 284 | peroxidase precursor [Raphanus sativus var. niger] |
| RefSeq | NP_181372.1 | 0 | 1 | 350 | 1 | 349 | peroxidase 22 (PER22) (P22) (PRXEA) / basic peroxidase E [Arabidopsis thaliana] |
| RefSeq | NP_181373.1 | 0 | 1 | 350 | 1 | 349 | peroxidase, putative [Arabidopsis thaliana] |
| Swiss-Prot | P17180 | 0 | 1 | 350 | 1 | 349 | PER3_ARMRU RecName: Full=Peroxidase C3; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1w4y_A | 0 | 30 | 336 | 1 | 308 | A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli |
| PDB | 1w4w_A | 0 | 30 | 336 | 1 | 308 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
| PDB | 1gx2_B | 0 | 30 | 336 | 2 | 309 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1gx2_A | 0 | 30 | 336 | 2 | 309 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1gwo_A | 0 | 30 | 336 | 2 | 309 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
