| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra017310 |
| Family | GT77 |
| Protein Properties | Length: 641 Molecular Weight: 72452 Isoelectric Point: 6.2489 |
| Chromosome | Chromosome/Scaffold: 04 Start: 15418116 End: 15421458 |
| Description | xyloglucanase 113 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT77 | 155 | 379 | 0 |
| LSNILVGAMDTKLLEALYWKGVPVFDMGSHMSTVDVGWGSPTFHKMGREKVILIDSVLPFGYELLMCDTDMVWLKNPLPYLARYPDADVLTSSDQVVPTV VDDSLDIWQQVSGAYNIGIFHWRPSESAKKLAKEWKDILIADDKVWDQNGFNEIVRRQLGPSVDGDSGLFYAYDGNLKVGILPASIFCSGHTYFVQAMYQ QLRLEPYALHTTFQYAGTEGKRHRL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 641 Download |
| MVEGWRNGFR EATNSKPLFV TIYATVIIGV LVSSFYVFSA IYSPTNGSTS WLSSPPLSTA 60 GRIHKLPQDN ATSQSLPVAL PPPAPEEEAK GKSSLGKIWV SPPKDKKMPP LEAFKLTKEL 120 FGERVKDNVI IVTFGNYAFM DFILTWVKHL TDLDLSNILV GAMDTKLLEA LYWKGVPVFD 180 MGSHMSTVDV GWGSPTFHKM GREKVILIDS VLPFGYELLM CDTDMVWLKN PLPYLARYPD 240 ADVLTSSDQV VPTVVDDSLD IWQQVSGAYN IGIFHWRPSE SAKKLAKEWK DILIADDKVW 300 DQNGFNEIVR RQLGPSVDGD SGLFYAYDGN LKVGILPASI FCSGHTYFVQ AMYQQLRLEP 360 YALHTTFQYA GTEGKRHRLR EGMVFFDPPE YYDAPGGFVS FKPSIPKSML LDGNHTIESH 420 FTLVNHQMKQ IRSALAIASL LNRTLVMPPI WCRLDRLWFG HPGTLEGSMT RQPFICPLDH 480 VFEVNIMLKE MPEEEFGPGI GIREYSFLDN PSLPKQVKES WLDVQLCQEG KEGCVASNIT 540 SSSGVLKYPK RSNEDTFKAI FSSFNDVKVI KFSSIEDAFT GFSDKGREER FRRRVKRYVG 600 IWCCEENKTP GHIYYDMYWD EKPGWKPVPP QTPEEDHPPL * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 2.0e-49 | 155 | 379 | 231 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD15452.2 | 0 | 108 | 640 | 1 | 528 | unknown protein [Arabidopsis thaliana] |
| DDBJ | BAH19600.1 | 0 | 1 | 640 | 1 | 644 | AT2G35610 [Arabidopsis thaliana] |
| RefSeq | NP_850250.1 | 0 | 1 | 640 | 1 | 644 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002328759.1 | 0 | 67 | 639 | 68 | 637 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519934.1 | 0 | 5 | 639 | 4 | 638 | reticulon3-A3, putative [Ricinus communis] |
