| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra017597 |
| Family | CE16 |
| Protein Properties | Length: 344 Molecular Weight: 37517.8 Isoelectric Point: 6.1208 |
| Chromosome | Chromosome/Scaffold: 09 Start: 16786333 End: 16788186 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 14 | 319 | 6.4e-27 |
| FGDSLVDNGNNNQLNSLARANYFPYGIDFSLGPTGRFSNGKTTVDVITELLGFDNYITPYAAARGEDILRGVNYASAAAGIREETGRQLGGRIAFAGQVA NHVNTVSQVVNILGDQNQASSYLSKCIYSIGLGSNDYLNNYFMPTFYSTGNQFTPDSFGDDLIARYTEQLRILYNNGARKFALIGVGAIGCSPNELAQNS RDGKTCDERINSANRLFNSKLVTIVDHFNQNTPDAKFTYINAYGIFQDIVTNPGRYGFRVTNAGCCGVGRNNGQITCLPGQAPCLNRNEYVFWDAFHPGE AANIII | |||
| Full Sequence |
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| Protein Sequence Length: 344 Download |
| MVASDPIAPC YFIFGDSLVD NGNNNQLNSL ARANYFPYGI DFSLGPTGRF SNGKTTVDVI 60 TELLGFDNYI TPYAAARGED ILRGVNYASA AAGIREETGR QLGGRIAFAG QVANHVNTVS 120 QVVNILGDQN QASSYLSKCI YSIGLGSNDY LNNYFMPTFY STGNQFTPDS FGDDLIARYT 180 EQLRILYNNG ARKFALIGVG AIGCSPNELA QNSRDGKTCD ERINSANRLF NSKLVTIVDH 240 FNQNTPDAKF TYINAYGIFQ DIVTNPGRYG FRVTNAGCCG VGRNNGQITC LPGQAPCLNR 300 NEYVFWDAFH PGEAANIIIG RRSFRREAAS DAHPYDIQQL ATL* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00657 | Lipase_GDSL | 7.0e-14 | 84 | 322 | 240 | + GDSL-like Lipase/Acylhydrolase. | ||
| cd01846 | fatty_acyltransferase_like | 5.0e-34 | 11 | 322 | 321 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 1.0e-64 | 9 | 326 | 322 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 5.0e-123 | 9 | 319 | 313 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM63021.1 | 0 | 1 | 343 | 20 | 362 | GDSL-motif lipase/hydrolase-like protein [Arabidopsis thaliana] |
| GenBank | AAM67249.1 | 0 | 5 | 343 | 23 | 361 | GDSL-motif lipase/hydrolase-like protein [Arabidopsis thaliana] |
| EMBL | CAA16754.1 | 0 | 5 | 343 | 288 | 626 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_199379.1 | 0 | 1 | 343 | 20 | 362 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
| RefSeq | NP_567570.1 | 0 | 5 | 343 | 23 | 361 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DN949899 | 343 | 2 | 344 | 0 |
| HO779075 | 337 | 8 | 344 | 0 |
| EV171401 | 275 | 17 | 291 | 0 |
| EV569796 | 250 | 1 | 250 | 0 |
| EV036131 | 246 | 74 | 319 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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