y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra017687 |
Family | GH35 |
Protein Properties | Length: 845 Molecular Weight: 95560.2 Isoelectric Point: 9.6314 |
Chromosome | Chromosome/Scaffold: 03 Start: 29768641 End: 29772665 |
Description | beta-galactosidase 11 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 47 | 351 | 0 |
LIIDGKRELLYSGSIHYPRSTPEMWPSIIQRAKQGGLNTIQTYVFWNVHELEQGKFNFSGRTDLVKFIKLIEKNGMYVTLRLGPFIQAEWTHGGLPYWLR EVPGIFFRTDNKEFKEHTERYVRTVLDKMKEEKLFASQGGPIILGQIENEYSAVQRAYKQDGINYIKWASKLVDSMNLGIPWVMCKHNDAPDPMINACNG RHCGDTFPGPNKENKPSLWTENWTTQFRVFGDSPVKRSVEDIAFSVARFFSKNGTHVNYYMYHGGTNFGRNGAHYVTTRYYDDAPLDEYGLEREPKYGHL KHLHN |
Full Sequence |
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Protein Sequence Length: 845 Download |
MRKPSLDRWL LAAFLVVLLS SSCAFASKKE VKKKTNNKEV TYDGTSLIID GKRELLYSGS 60 IHYPRSTPEM WPSIIQRAKQ GGLNTIQTYV FWNVHELEQG KFNFSGRTDL VKFIKLIEKN 120 GMYVTLRLGP FIQAEWTHGG LPYWLREVPG IFFRTDNKEF KEHTERYVRT VLDKMKEEKL 180 FASQGGPIIL GQIENEYSAV QRAYKQDGIN YIKWASKLVD SMNLGIPWVM CKHNDAPDPM 240 INACNGRHCG DTFPGPNKEN KPSLWTENWT TQFRVFGDSP VKRSVEDIAF SVARFFSKNG 300 THVNYYMYHG GTNFGRNGAH YVTTRYYDDA PLDEYGLERE PKYGHLKHLH NALNLCKKPL 360 LWGQPRTEKP GKDTEIRYYE EPGTKSCAAF LANNNTEAAE TIKFRGKEYV IAPRSISILP 420 DCKTVVYNTA QIVSHHTSRN FMKSKKANKK FDFKVFTEPL PHKLKGDSYI PVELYGLTKD 480 KTDYGWYTTS FKINKNQLPK KKGAKTTVRI ASLGHALHAW FNGEYLGNGH GSHDEKSFVF 540 QEPVTLKEGE NHLVMLGVLT GFPDSGAYLE HRYTGPRSVS ILGLSSGVLD LTESSKWGNK 600 VGMEGERLGI HTEKGLKKVK WQKFTGKAPG LTWYQTYFDA PESESAAAVR MSGMGKGLIW 660 VNGEGVGRYW MSFLNPLGQS TQIEYHIPRS FLKPKKNLLV IFEEEPNVKP EIIDFVIVNR 720 DTVCSYVGED YTPSVRHWTR KQDQVQAITD NVSLTATLKC SGNKKISEVE FASFGNPIGT 780 CGNFTLGTCN APVSKQVIEK HCLGKGECVI PVNKSTFQQD KKDSCKNVVK TLAVQVKCAR 840 DKKN* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-6 | 62 | 197 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 7.0e-18 | 758 | 838 | 84 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 4.0e-23 | 42 | 343 | 349 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-146 | 46 | 353 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 42 | 839 | 827 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD24606.1 | 0 | 43 | 844 | 31 | 832 | putative beta-galactosidase [Arabidopsis thaliana] |
EMBL | CAA17766.1 | 0 | 36 | 844 | 50 | 831 | beta-galactosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_179264.2 | 0 | 39 | 844 | 43 | 848 | BGAL13; beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_567973.1 | 0 | 1 | 844 | 1 | 845 | BGAL11 (beta-galactosidase 11); beta-galactosidase [Arabidopsis thaliana] |
Swiss-Prot | Q9SCU8 | 0 | 1 | 840 | 7 | 839 | BGL14_ARATH RecName: Full=Beta-galactosidase 14; Short=Lactase 14; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-40 | 46 | 349 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 5e-34 | 39 | 349 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 5e-34 | 39 | 349 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |