| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra017830 |
| Family | AA2 |
| Protein Properties | Length: 252 Molecular Weight: 27385.8 Isoelectric Point: 8.4746 |
| Chromosome | Chromosome/Scaffold: 03 Start: 30744243 End: 30745512 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 8 | 235 | 0 |
| NKAEKDHPDNLSLAGDGFDTVIKAKQALDAVANCRNKVSCADILTIATRDVVNLAGGPRYEVELGRRDGLSSTADSVEGKLPHPTDNVNQLTSLFAKNGL SRKDMIALSGAHTLGFAHCKLVFNRIYNFNSTTQVDPTVNKDYVAALQGSCPRNVDPSVAINMDPTTPRQFDNVYYQNLQQGKGLFTSDQDLFTDSRSKP IVNLWASNAKLFNQDFVNSMIKLGRVGV | |||
| Full Sequence |
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| Protein Sequence Length: 252 Download |
| MIASTDNNKA EKDHPDNLSL AGDGFDTVIK AKQALDAVAN CRNKVSCADI LTIATRDVVN 60 LAGGPRYEVE LGRRDGLSST ADSVEGKLPH PTDNVNQLTS LFAKNGLSRK DMIALSGAHT 120 LGFAHCKLVF NRIYNFNSTT QVDPTVNKDY VAALQGSCPR NVDPSVAINM DPTTPRQFDN 180 VYYQNLQQGK GLFTSDQDLF TDSRSKPIVN LWASNAKLFN QDFVNSMIKL GRVGVKTGRN 240 GNIRRDCGAF N* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 2.0e-5 | 184 | 215 | 32 | + Peroxidase. | ||
| cd00691 | ascorbate_peroxidase | 1.0e-20 | 9 | 236 | 236 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| pfam00141 | peroxidase | 2.0e-39 | 7 | 120 | 114 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 7.0e-53 | 6 | 251 | 251 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 2.0e-128 | 1 | 250 | 250 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL49862.1 | 0 | 1 | 251 | 79 | 329 | putative peroxidase [Arabidopsis thaliana] |
| GenBank | AAM63630.1 | 0 | 1 | 251 | 79 | 329 | peroxidase, prxr2 [Arabidopsis thaliana] |
| EMBL | CAA67362.1 | 0 | 1 | 251 | 62 | 312 | peroxidase ATP9a [Arabidopsis thaliana] |
| RefSeq | NP_195468.1 | 0 | 1 | 251 | 79 | 329 | peroxidase 50 (PER50) (P50) (PRXR2) [Arabidopsis thaliana] |
| RefSeq | NP_195469.1 | 0 | 1 | 251 | 79 | 329 | peroxidase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hdl_A | 0 | 1 | 251 | 54 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1qo4_A | 0 | 9 | 251 | 63 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1pa2_A | 0 | 9 | 251 | 63 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3atj_B | 0 | 1 | 251 | 55 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 3atj_A | 0 | 1 | 251 | 55 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX131445 | 251 | 1 | 251 | 0 |
| CX194474 | 249 | 1 | 249 | 0 |
| EE466047 | 204 | 1 | 204 | 0 |
| EW719621 | 225 | 28 | 252 | 0 |
| CX194492 | 229 | 18 | 246 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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