| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra017847 |
| Family | GT34 |
| Protein Properties | Length: 439 Molecular Weight: 50836.6 Isoelectric Point: 6.7865 |
| Chromosome | Chromosome/Scaffold: 03 Start: 30912442 End: 30913758 |
| Description | Galactosyl transferase GMA12/MNN10 family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT34 | 111 | 386 | 0 |
| NRIVMVTGSQPAPCKNPIGDHLLLRCFKNKVDYCRIHGHDIFYSNSLLHPKMNSYWTKLPAVKAAMLAHPEAEWIWWVDSDAIFTDMEFTLPLHRYRYHN LVVHGWPSIIYDQQSWTAVNAGVFLIRNCQWSMDLIDTWKSMGPVSPDYAKWGPIQRSIFKDKLFPESDDQTALIYLLYKHKEVYYPKIYLEAEYYFQGY WIGVVGGFFANVTERYLEMEREDATLRRRHAEKVSERYGAFREERFLKGEFGGRGSRRRAFVTHFTGCQPCSGDHN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 439 Download |
| MGKHGGAKTR TAVCFSDGVI FFAGAFMSLI LVWSYFSIFS PSSNFTLIGF RRGTEPAKCS 60 GFDMQFDPED PGSFYDDPDL SYSIERPITG WDEKRKQWLE SHPSFKPGSE NRIVMVTGSQ 120 PAPCKNPIGD HLLLRCFKNK VDYCRIHGHD IFYSNSLLHP KMNSYWTKLP AVKAAMLAHP 180 EAEWIWWVDS DAIFTDMEFT LPLHRYRYHN LVVHGWPSII YDQQSWTAVN AGVFLIRNCQ 240 WSMDLIDTWK SMGPVSPDYA KWGPIQRSIF KDKLFPESDD QTALIYLLYK HKEVYYPKIY 300 LEAEYYFQGY WIGVVGGFFA NVTERYLEME REDATLRRRH AEKVSERYGA FREERFLKGE 360 FGGRGSRRRA FVTHFTGCQP CSGDHNPSYD GDTCWNEMIR ALNFADNQVM RAYGYVHTDL 420 SKTSPLQPLP FDYPDETW* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05637 | Glyco_transf_34 | 4.0e-77 | 110 | 385 | 300 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
| PLN03182 | PLN03182 | 6.0e-140 | 56 | 421 | 368 | + xyloglucan 6-xylosyltransferase; Provisional | ||
| PLN03181 | PLN03181 | 0 | 1 | 437 | 441 | + glycosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_565544.1 | 0 | 1 | 438 | 16 | 449 | galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] |
| RefSeq | NP_680773.1 | 0 | 1 | 438 | 1 | 432 | galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] |
| RefSeq | XP_002310890.1 | 0 | 64 | 436 | 84 | 454 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002320005.1 | 0 | 61 | 436 | 82 | 455 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525290.1 | 0 | 14 | 436 | 20 | 443 | transferase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
| xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
