| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra017888 |
| Family | GT20 |
| Protein Properties | Length: 862 Molecular Weight: 96971.9 Isoelectric Point: 6.4137 |
| Chromosome | Chromosome/Scaffold: 03 Start: 31349727 End: 31352464 |
| Description | trehalose phosphate synthase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 50 | 545 | 0 |
| DAVSLPCRERKIIVANFLSLNGKKDSETGQWKFSLDNDSPMLHLKDGFSPETEVIYVGSLKTDVDVSEQDEVSQTLFEEFSCVPTFIPQDVHRKFYLGFC KQQLWPLFHYMLPMCPDHGERFDRSLWQAYVSANKIFADKVMGVINLEEDYICIHNYHLMLLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVREEILR GLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLKILPIGIQMGRLESVLNLPATAEKLKEIQEKYRGKKVILGVDDMDIFKGLS LKILAFEHLLQQYPSMQGKLVLIQIVNPARGSGKDVQEAKKETYYTVNRINERYGLPGYEPVVLIDRPVPQFEKSAYNAMAECCIVNAVRDGMNLVPYKY TVCRQGTPEMDKSLGLSEDSPRTSMLVLSEFIGCSLSLSGAIRVNPWDVDAVADSMYSAITMSDFEKQLRHKKHYHYISTHDVAYWSRSFTQDLER | |||
| Full Sequence |
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| Protein Sequence Length: 862 Download |
| MGSKSFGNLL DLASGDLLDI PHTPRALPRV MTVPGIISDG YGISGGADSD AVSLPCRERK 60 IIVANFLSLN GKKDSETGQW KFSLDNDSPM LHLKDGFSPE TEVIYVGSLK TDVDVSEQDE 120 VSQTLFEEFS CVPTFIPQDV HRKFYLGFCK QQLWPLFHYM LPMCPDHGER FDRSLWQAYV 180 SANKIFADKV MGVINLEEDY ICIHNYHLML LPTFLRRRFH RVKLGFFLHS PFPSSEIYRT 240 LPVREEILRG LLNCDLIGFH TFDYARHFLS CCCRMLGLEY ESKRGHIALD YLGRTVFLKI 300 LPIGIQMGRL ESVLNLPATA EKLKEIQEKY RGKKVILGVD DMDIFKGLSL KILAFEHLLQ 360 QYPSMQGKLV LIQIVNPARG SGKDVQEAKK ETYYTVNRIN ERYGLPGYEP VVLIDRPVPQ 420 FEKSAYNAMA ECCIVNAVRD GMNLVPYKYT VCRQGTPEMD KSLGLSEDSP RTSMLVLSEF 480 IGCSLSLSGA IRVNPWDVDA VADSMYSAIT MSDFEKQLRH KKHYHYISTH DVAYWSRSFT 540 QDLERACRDH YSKRCWGVGW GLGFRLIALS PNFRRLSVEQ TVSAYRRSSK RAIFLDYDGT 600 LVPEASIVKE PSADVISALK TLCTDPDNTV FIVSGSGKVS LSEWLAPCEN LGIAAERGYF 660 TRWNNSSDWE TSGFSDDLEW KKIVEPIMRL YTETTDGSNI EAKESALVWH HQDADPDFGS 720 CQAKELLDHL ETVLVKEPVV VHRGHQIVEV KPQGVSKGLV TGKVLSRMHE EGNAPDFVVC 780 IGDDRSDEEM FESIATTLSA QSLSVSAEIF ACTVGRKPSK AKYFLDEVSD VVKLLQGLAN 840 TSSSPKPRYS SHLRVSSESV V* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 3.0e-160 | 57 | 847 | 833 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 847 | 853 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 58 | 545 | 492 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 116 | 839 | 729 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 61 | 544 | 484 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF01061.1 | 0 | 1 | 861 | 1 | 861 | putative trehalose-6-phosphate synthase [Arabidopsis thaliana] |
| EMBL | CAN78769.1 | 0 | 1 | 861 | 1 | 857 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_176221.1 | 0 | 1 | 861 | 1 | 861 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | XP_002264873.1 | 0 | 1 | 848 | 1 | 844 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002521023.1 | 0 | 1 | 861 | 1 | 861 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wtx_D | 0 | 143 | 545 | 75 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_C | 0 | 143 | 545 | 75 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_B | 0 | 143 | 545 | 75 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_A | 0 | 143 | 545 | 75 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1gz5_D | 0 | 143 | 545 | 74 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 778 | 69 | 842 | 0 |
| HO779327 | 515 | 98 | 612 | 0 |
| HO779327 | 254 | 609 | 862 | 0 |
| HO797286 | 477 | 376 | 852 | 0 |
| JZ151866 | 332 | 401 | 732 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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