y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra017900 |
Family | GT77 |
Protein Properties | Length: 350 Molecular Weight: 40024.1 Isoelectric Point: 9.5229 |
Chromosome | Chromosome/Scaffold: 03 Start: 31523225 End: 31531698 |
Description | RhamnoGalacturonan specific Xylosyltransferase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 111 | 328 | 0 |
EKVLVIAEDYALLYKVNEKWPGHAVLIPPALDPKAAHHFGSQGFYNLTSRRPQHLLDILELGYNVMYNDVDMVWLQDPFKYLQGGHDVYFMDDMTAIKPL NHSHGLPTSRNGVTYVCSCMIFLRCTSGAKLLLKKWVEEIRTQPWSNTEAKKPHDQPAFNRALHKTTHQVDVYLLPQSAFPSGGLYFKNKKWVNETNGKH VIVHNNYIVGYNQKLKRF |
Full Sequence |
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Protein Sequence Length: 350 Download |
MAQQQQRPIS NRPISFLNRN GLFLLLLALL VFLGVYLPLS ESPLFMFQNR TSSSSPPSPS 60 FVVSDWRYYS LAQAAKFVAK NGTVIVCAVS YPFLPFLNNW LISISRQKHH EKVLVIAEDY 120 ALLYKVNEKW PGHAVLIPPA LDPKAAHHFG SQGFYNLTSR RPQHLLDILE LGYNVMYNDV 180 DMVWLQDPFK YLQGGHDVYF MDDMTAIKPL NHSHGLPTSR NGVTYVCSCM IFLRCTSGAK 240 LLLKKWVEEI RTQPWSNTEA KKPHDQPAFN RALHKTTHQV DVYLLPQSAF PSGGLYFKNK 300 KWVNETNGKH VIVHNNYIVG YNQKLKRFQD FGLWLVDDFS HESPLGKLE* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 3.0e-45 | 108 | 328 | 226 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Gene Ontology | |
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GO Term | Description |
GO:0005783 | endoplasmic reticulum |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX32892.1 | 0 | 5 | 349 | 10 | 367 | putative xylosyltransferase [Arabidopsis thaliana] |
RefSeq | NP_176048.1 | 0 | 1 | 349 | 1 | 351 | UDP-xylosyltransferase [Arabidopsis thaliana] |
RefSeq | NP_192084.1 | 0 | 64 | 349 | 81 | 367 | RGXT2 (rhamnogalacturonan xylosyltransferase 2); UDP-xylosyltransferase [Arabidopsis thaliana] |
RefSeq | NP_192086.1 | 0 | 66 | 349 | 77 | 361 | RGXT1 (rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase [Arabidopsis thaliana] |
RefSeq | NP_849279.1 | 0 | 64 | 349 | 76 | 360 | unknown protein [Arabidopsis thaliana] |