| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra018103 |
| Family | GT31 |
| Protein Properties | Length: 663 Molecular Weight: 75387.3 Isoelectric Point: 7.5831 |
| Chromosome | Chromosome/Scaffold: 06 Start: 10253258 End: 10255760 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 428 | 610 | 0 |
| ERMAVRKSWMQHKLIRSSKVVARFFVALHSRKSINVELKKEAEFFGDIIVVPYLDSYDLVVLKTVAICEYGAHQLAAKYIMKCDDDTFVRVDAVLREAKK TPTDRSLYIGNINYYHKPLRQGKWAVTYEEWPEEDYPPYANGPGYILSTDIARFIVKEFEQHKLRLFKMEDVSVGMWVEQFNN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 663 Download |
| MFSKKRSIQI LMAVGVLYML LVTLEIPLVY RSGFNTLSHD PLTRPDHLGS ELDLQERRRA 60 PGRPFRSLIY QETVSVAPAR SQRRRLSQEI VISGLKFDPD PSSRDESLEL HESAKEAWEV 120 GRKLWEELES GKALKALKEE TKKKTVKLGS SSCPVSVSLS GSDLLTRGKV IELPCGLTLG 180 SHITVVGKPR AAHSEMDPKI SMGNEEDEAV KVSQFIMELQ GLKAVEGEDP PKILHFNPRL 240 KGDWSGKPVI EQNTCYRMQW SSAQRCEGWR SSDDEETVDG QVKCEKWVQE NATSYSKEET 300 NKATWWLSRF IRRSKKVAVE WPFPFTEEKL FVLMLTAGLE GYHVSVDGKH VTSFPFRTGF 360 TLEDATGLTV TGDIDVQAVF AGSLPTSHPS FAPQRHLDLS RKWQAPSVSG EEVELFIGIL 420 SAGNHFAERM AVRKSWMQHK LIRSSKVVAR FFVALHSRKS INVELKKEAE FFGDIIVVPY 480 LDSYDLVVLK TVAICEYGAH QLAAKYIMKC DDDTFVRVDA VLREAKKTPT DRSLYIGNIN 540 YYHKPLRQGK WAVTYEEWPE EDYPPYANGP GYILSTDIAR FIVKEFEQHK LRLFKMEDVS 600 VGMWVEQFNN SVKPVDYEHS INFCQFGCIE NYLTAHYQSP RQMICLWDKL VLTGKPHCCN 660 MR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 4.0e-15 | 174 | 379 | 206 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 2.0e-15 | 170 | 380 | 211 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 5.0e-20 | 170 | 379 | 210 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 3.0e-21 | 427 | 606 | 195 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 1.0e-115 | 167 | 662 | 508 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD55296.1 | 0 | 12 | 662 | 1 | 642 | AC008263_27 ESTs gb |
| GenBank | ABK95149.1 | 0 | 19 | 662 | 1 | 642 | unknown [Populus trichocarpa] |
| DDBJ | BAA97209.1 | 0 | 2 | 662 | 21 | 681 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_201068.1 | 0 | 2 | 662 | 21 | 681 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002511491.1 | 0 | 2 | 662 | 19 | 670 | galactosyltransferase, putative [Ricinus communis] |
