| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra018328 |
| Family | AA1 |
| Protein Properties | Length: 515 Molecular Weight: 57644.5 Isoelectric Point: 9.2676 |
| Chromosome | Chromosome/Scaffold: 05 Start: 7492095 End: 7494147 |
| Description | laccase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 34 | 497 | 0 |
| LRNPWADGPEYITQCPIRPGQSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIIYPRLGSPYPFHMPKRDIPILLGEWWDRNPMDVLRQAQFTGAAANV SDAYTINGQPGDLYRCSRSETVRFPIFPGETVQLRVINAGLNQELFFSVANHQLTVVETDSAYTKPFTTSVIMIGPGQTTNVLLTANQRPGRYYMAARAY NSANAPFDNTTTTAILEYVNAPTRRGRGRGQIAPGFPVLPGFNDTATATAFTNRLRYWKRAPVPLQVDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAA SINNQSFVLPRRNSIMQAYYQGMPGIFTTDFPPVPPVQFDYTGNVSRGLWQPVKGTKAYKLKYKANVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGN FNPRTDPARFNLFDPPERNTIGTPPGGWVAIRFVADNPGAWFMHCHIDSHLGWGLAMVFLVENG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 515 Download |
| MESSQRFSSL AFIALLAYFA FLASAELHVR EFVLRNPWAD GPEYITQCPI RPGQSYTYRF 60 TIEDQEGTLW WHAHSRWLRA TVYGALIIYP RLGSPYPFHM PKRDIPILLG EWWDRNPMDV 120 LRQAQFTGAA ANVSDAYTIN GQPGDLYRCS RSETVRFPIF PGETVQLRVI NAGLNQELFF 180 SVANHQLTVV ETDSAYTKPF TTSVIMIGPG QTTNVLLTAN QRPGRYYMAA RAYNSANAPF 240 DNTTTTAILE YVNAPTRRGR GRGQIAPGFP VLPGFNDTAT ATAFTNRLRY WKRAPVPLQV 300 DENLFFTVGL GLINCSNPNS PRCQGPNGTR FAASINNQSF VLPRRNSIMQ AYYQGMPGIF 360 TTDFPPVPPV QFDYTGNVSR GLWQPVKGTK AYKLKYKANV QIVLQDTSIV TPENHPMHLH 420 GYQFYVVGSG FGNFNPRTDP ARFNLFDPPE RNTIGTPPGG WVAIRFVADN PGAWFMHCHI 480 DSHLGWGLAM VFLVENGRGQ LQSVQAPPLD LPRC* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07731 | Cu-oxidase_2 | 1.0e-45 | 363 | 498 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 1.0e-55 | 36 | 492 | 481 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-58 | 37 | 492 | 497 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-74 | 37 | 492 | 484 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 34 | 514 | 485 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_180580.1 | 0.00004 | 1 | 34 | 1 | 34 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
| RefSeq | NP_180580.1 | 0 | 34 | 514 | 90 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002319955.1 | 0 | 34 | 514 | 97 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326089.1 | 0 | 34 | 514 | 97 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516345.1 | 0 | 34 | 514 | 97 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 37 | 492 | 70 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asq_A | 0 | 37 | 492 | 70 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asp_B | 0 | 37 | 492 | 70 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1asp_A | 0 | 37 | 492 | 70 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1aso_B | 0 | 37 | 492 | 70 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
