| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra018559 |
| Family | GH9 |
| Protein Properties | Length: 515 Molecular Weight: 57450.6 Isoelectric Point: 9.4754 |
| Chromosome | Chromosome/Scaffold: 05 Start: 9247438 End: 9250014 |
| Description | glycosyl hydrolase 9B13 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 50 | 505 | 0 |
| NYKDALTKSILFFEGQRSGKLPPNQRMTWRRDSGLSDGSALHVDLVGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGGLMKSELGNAKVAIRWATDYLLK ATSRPDTIYVQVGDANKDHSCWERPEDMDTQRSVFKVDKNTPGSDVAAETAAALAAAAIVFRKSDPSYSKILLRRAIRVFAFADRYRGTYSAGLKPDVCP FYCSFSGYQDELLWGAAWLQKATRSLKYLNYIKVNGQILGAAEYDNTFGWDNKHAGARILLSKTFLVQKMKTLSEYKGHADNFICSVIPGAPFYISQYTP GGLLFKMADENMQYVTSTSFLLLTYAKYLTSARTVVHCGGSVYTPGRLRSIAKKQVDYLLGDNPLRMSYMVGYGPKFPRRIHHRGSSLPCVASHPAKIQC HQGFSIMHSQSPNPNFLVGAVVGGPDKHDRFPDVRSDYEQSEPATYINAPLVGALA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 515 Download |
| MAFLGFSSAS YTFRVIIFLS LFFFLCNGFS YPDSSLFYTH HHRHNLAKHN YKDALTKSIL 60 FFEGQRSGKL PPNQRMTWRR DSGLSDGSAL HVDLVGGYYD AGDNIKFGFP MAFTTTMLSW 120 SVIEFGGLMK SELGNAKVAI RWATDYLLKA TSRPDTIYVQ VGDANKDHSC WERPEDMDTQ 180 RSVFKVDKNT PGSDVAAETA AALAAAAIVF RKSDPSYSKI LLRRAIRVFA FADRYRGTYS 240 AGLKPDVCPF YCSFSGYQDE LLWGAAWLQK ATRSLKYLNY IKVNGQILGA AEYDNTFGWD 300 NKHAGARILL SKTFLVQKMK TLSEYKGHAD NFICSVIPGA PFYISQYTPG GLLFKMADEN 360 MQYVTSTSFL LLTYAKYLTS ARTVVHCGGS VYTPGRLRSI AKKQVDYLLG DNPLRMSYMV 420 GYGPKFPRRI HHRGSSLPCV ASHPAKIQCH QGFSIMHSQS PNPNFLVGAV VGGPDKHDRF 480 PDVRSDYEQS EPATYINAPL VGALAYFAHS FGQL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 0 | 6 | 514 | 510 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 47 | 510 | 465 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 50 | 505 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 19 | 508 | 493 | + cellulase | ||
| PLN02175 | PLN02175 | 0 | 20 | 508 | 490 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_192138.1 | 0 | 11 | 514 | 12 | 516 | AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002271736.1 | 0 | 18 | 514 | 24 | 511 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301487.1 | 0 | 6 | 514 | 1 | 511 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002320998.1 | 0 | 4 | 514 | 1 | 510 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523114.1 | 0 | 46 | 514 | 42 | 510 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 49 | 505 | 3 | 426 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1ksc_A | 0 | 49 | 505 | 3 | 426 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1ks8_A | 0 | 49 | 505 | 3 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 50 | 512 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 50 | 512 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
