| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra018639 |
| Family | GT29 |
| Protein Properties | Length: 306 Molecular Weight: 35147.5 Isoelectric Point: 10.1738 |
| Chromosome | Chromosome/Scaffold: 06 Start: 2859727 End: 2860644 |
| Description | Glycosyltransferase family 29 (sialyltransferase) family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT29 | 77 | 284 | 0 |
| SVSRYSSCAVVGNSGTLLNSQYGDVIDKHEIVIRLNNAKTQRFENKVGSKTSVSFINSNILHQCARRERCNCHPYGDSVPIVMYICQPIHLLDYTVCKPS HKAPLVITDPRFDVLCARIVKYYSVKKFLEEKRDEGFGDWSKGHEGSLFHYSSGMQAVMLAVGVCERVSVFGFGKSNLTKHHYHTNQKAELKLHDYEAEY RLYHDLEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 306 Download |
| MATPIGGRRR RSRSYAPSKF PVTNLRSSLQ VSRYWSEFKR NLRIWTRTKK AYEPRIILDL 60 IRLIKNPIES HRNGVVSVSR YSSCAVVGNS GTLLNSQYGD VIDKHEIVIR LNNAKTQRFE 120 NKVGSKTSVS FINSNILHQC ARRERCNCHP YGDSVPIVMY ICQPIHLLDY TVCKPSHKAP 180 LVITDPRFDV LCARIVKYYS VKKFLEEKRD EGFGDWSKGH EGSLFHYSSG MQAVMLAVGV 240 CERVSVFGFG KSNLTKHHYH TNQKAELKLH DYEAEYRLYH DLENNPRAIP FLPKAFKIPS 300 VKVYH* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 6.0e-29 | 39 | 284 | 268 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAJ15145.1 | 0 | 33 | 305 | 114 | 384 | sialyltransferase-like protein [Gossypium raimondii] |
| EMBL | CAN64919.1 | 0 | 33 | 305 | 119 | 389 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_172305.1 | 0 | 4 | 305 | 98 | 398 | glycosyl transferase family 29 protein / sialyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277132.1 | 0 | 33 | 305 | 119 | 389 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306228.1 | 0 | 28 | 305 | 115 | 390 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.000000000000005 | 43 | 262 | 57 | 261 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2wnb_A | 0.000000000000005 | 43 | 262 | 57 | 261 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.000000000000007 | 43 | 262 | 57 | 261 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EW735533 | 221 | 65 | 283 | 0 |
| DR939789 | 251 | 56 | 306 | 0 |
| CU539180 | 233 | 47 | 279 | 0 |
| CN948046 | 217 | 80 | 296 | 0 |
| GT243663 | 263 | 32 | 287 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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