| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra018677 |
| Family | AA2 |
| Protein Properties | Length: 306 Molecular Weight: 33995.8 Isoelectric Point: 5.8 |
| Chromosome | Chromosome/Scaffold: 06 Start: 2668885 End: 2670679 |
| Description | ascorbate peroxidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 64 | 286 | 0 |
| RGLIAEKNCAPIMVRLAWHSAGTFDCASRTGGPFGTMRFDDELAHGANNGLHIALRLLEPIREQFPTISHADFHQLAGVVAVEVTGGPEIPFHPGREDKP QPPPEGRLPDATKGCDHLRQVFLKQMGLTDQDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLPSDKALLDDPVFRPLVEK YANDEEAFFADYAEAHLKLSELG | |||
| Full Sequence |
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| Protein Sequence Length: 306 Download |
| MLATVFSSFD ESGFVSSLSL SWICSYGSLL VDRFFEVLAK MTKNYPAVSE EYQKAIEKCK 60 RKLRGLIAEK NCAPIMVRLA WHSAGTFDCA SRTGGPFGTM RFDDELAHGA NNGLHIALRL 120 LEPIREQFPT ISHADFHQLA GVVAVEVTGG PEIPFHPGRE DKPQPPPEGR LPDATKGCDH 180 LRQVFLKQMG LTDQDIVALS GAHTLGRCHK DRSGFEGAWT SNPLIFDNSY FKELLSGEKE 240 GLLQLPSDKA LLDDPVFRPL VEKYANDEEA FFADYAEAHL KLSELGYYFE SLNLSRCKLN 300 SIMIF* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00314 | plant_peroxidase_like | 4.0e-46 | 60 | 264 | 233 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| PLN02608 | PLN02608 | 2.0e-117 | 46 | 287 | 242 | + L-ascorbate peroxidase | ||
| PLN02879 | PLN02879 | 2.0e-126 | 41 | 287 | 247 | + L-ascorbate peroxidase | ||
| cd00691 | ascorbate_peroxidase | 4.0e-134 | 45 | 290 | 254 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| PLN02364 | PLN02364 | 5.0e-151 | 41 | 287 | 247 | + L-ascorbate peroxidase 1 | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN60795.1 | 0 | 41 | 287 | 1 | 247 | ascorbate peroxidase [Brassica juncea] |
| GenBank | ACV92696.1 | 0 | 41 | 287 | 1 | 247 | APX [Brassica rapa subsp. pekinensis] |
| DDBJ | BAB84008.1 | 0 | 41 | 287 | 1 | 247 | ascorbate peroxidase [Brassica oleracea] |
| DDBJ | BAB84009.1 | 0 | 41 | 287 | 1 | 247 | ascorbate peroxidase [Brassica oleracea] |
| EMBL | CAA72247.1 | 0 | 41 | 287 | 1 | 247 | L-ascorbate peroxidase [Brassica napus] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1apx_D | 0 | 43 | 287 | 2 | 246 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1apx_C | 0 | 43 | 287 | 2 | 246 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1apx_B | 0 | 43 | 287 | 2 | 246 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1apx_A | 0 | 43 | 287 | 2 | 246 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 2xj6_A | 0 | 43 | 287 | 2 | 246 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| L-ascorbate degradation III | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
| L-ascorbate degradation V | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CX187648 | 252 | 36 | 287 | 0 |
| EX100467 | 252 | 36 | 287 | 0 |
| EX094893 | 252 | 36 | 287 | 0 |
| GR446444 | 252 | 36 | 287 | 0 |
| ES906209 | 252 | 36 | 287 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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