| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra018721 |
| Family | GH35 |
| Protein Properties | Length: 733 Molecular Weight: 81671.7 Isoelectric Point: 7.4211 |
| Chromosome | Chromosome/Scaffold: 06 Start: 2335904 End: 2339744 |
| Description | beta-galactosidase 15 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 34 | 244 | 0 |
| RGFPVWLHNIPGMVFRTTNKAFMDEMQNFTTMIVDMVKKEKLFASQGGPIILAQIENEYGNVMEPYGEAGKTYIKWCANMAQALDVGVPWIMCQQNDAPQ PMLNTCNGFYCDNFKPNNPNTPKMWTENWTGWFKQWGGKNPHRTTEDVAYSVAKFFQRGGTFNNYYMYHGGTNFDRTAGGPYITTSYDYDAPLDEYGNLN QPKYGHLKKLH | |||
| Full Sequence |
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| Protein Sequence Length: 733 Download |
| MPQLFLMMVG PSPLMVIVEF FFLVQSITLE APLRGFPVWL HNIPGMVFRT TNKAFMDEMQ 60 NFTTMIVDMV KKEKLFASQG GPIILAQIEN EYGNVMEPYG EAGKTYIKWC ANMAQALDVG 120 VPWIMCQQND APQPMLNTCN GFYCDNFKPN NPNTPKMWTE NWTGWFKQWG GKNPHRTTED 180 VAYSVAKFFQ RGGTFNNYYM YHGGTNFDRT AGGPYITTSY DYDAPLDEYG NLNQPKYGHL 240 KKLHDVLHSM EKILTYGNIS TIDFGKSASA TIYTTGEGSS CFFGNGNENS DAKISFQGKS 300 YVVPAWSVTI LPDCKTEAYN TAKITTQISM MVKKPNEAED DPSTLKWSWR PENMDDFLLK 360 GKGESTKTQL VDQKVVSNDQ SDYLWYMTTV KFRKRDLVLG KNMTLRINST AHVLHAFVNG 420 KHIGNQHAEN GKFHYVFEKD AKFKSGRNVI SLLSITVGLQ NYGSFFESVP TGITGPISII 480 GRNSDETIVK DLSAHKWSYK TGLNGFENQL FRTESPSKWS AESVPLNRSM TWYKATFKAP 540 FGNDPVVVDL LGLGKGTAWV NGNNIGRYWP AFISSGDGCS VKCNYRGAYH AEKCLTGCGE 600 PTQRWYHVPR SFLNAGDNTL VLFEEMGGNP SLVNFQTTRV GSVCANVYEK NVIELSCDRK 660 PISAIKFASF GNPNGNCGSF EKGTCEEINN AVDILTQECV GKEKCSIDVS TEKFGAPDCG 720 GAARRLAIEA IC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 2.0e-15 | 655 | 732 | 80 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 9.0e-100 | 17 | 244 | 255 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 17 | 732 | 753 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAJ09953.1 | 0 | 17 | 732 | 95 | 827 | beta-galactosidase [Mangifera indica] |
| EMBL | CBI27773.1 | 0 | 17 | 732 | 110 | 835 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683341.1 | 0 | 35 | 732 | 145 | 786 | BGAL15 (beta-galactosidase 15); beta-galactosidase [Arabidopsis thaliana] |
| Swiss-Prot | Q9C6W4 | 0 | 35 | 732 | 122 | 779 | BGL15_ARATH RecName: Full=Beta-galactosidase 15; Short=Lactase 15; Flags: Precursor |
| RefSeq | XP_002276918.1 | 0 | 17 | 732 | 41 | 766 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 9e-22 | 27 | 243 | 100 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-16 | 27 | 318 | 103 | 407 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-16 | 27 | 318 | 103 | 407 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 647 | 17 | 640 | 0 |
| HO780602 | 591 | 17 | 589 | 0 |
| HO795552 | 530 | 27 | 550 | 0 |
| EV537111 | 284 | 67 | 345 | 0 |
| HO780602 | 35 | 593 | 627 | 0.0000006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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