| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra018801 |
| Family | GT10 |
| Protein Properties | Length: 625 Molecular Weight: 70077.5 Isoelectric Point: 8.2373 |
| Chromosome | Chromosome/Scaffold: 06 Start: 1868345 End: 1873347 |
| Description | fucosyltransferase 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT10 | 157 | 389 | 0 |
| HKPETLGIIRSMESAQYYPDNDLSQARRRGYDVVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTEKAIAAAFISNCGARNFRLQALEALMRTRIKIDSYGG CQRNRDGKVDKVEALKRYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPNIEDFAPASGSILQIKSMEDVEPVAKRMKFLADNPAAYNHTLRWKYE GPSDSFKALVDMAAVHSSCRLCIFLATRIQEQE | |||
| Full Sequence |
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| Protein Sequence Length: 625 Download |
| MGPFSNLRGP RIGATHDELP LANDSSSSSS PSSHSSSIRR KLSNLLPICV ALVVIAEIGF 60 LGRLDKVALV DTLTDFFTQS PSLSPPSRSE RKIGVVGTEK SCEEWLMRED SVTYSRDFRK 120 NPIFISGGAK DFQSCSVDCT FEASAGKTAD ATFGLGHKPE TLGIIRSMES AQYYPDNDLS 180 QARRRGYDVV MTTSLSSDVP VGYFSWAEYD IMAPVQPKTE KAIAAAFISN CGARNFRLQA 240 LEALMRTRIK IDSYGGCQRN RDGKVDKVEA LKRYKFSLAF ENTNEEDYVT EKFFQSLVAG 300 SVPVVVGAPN IEDFAPASGS ILQIKSMEDV EPVAKRMKFL ADNPAAYNHT LRWKYEGPSD 360 SFKALVDMAA VHSSCRLCIF LATRIQEQEE KSPSFKKRPC KCTRGGSDTV YHVFVRERGR 420 FEMESIFLRG KNLTLEALES AVVAKFKSLK HEPVWKKERP ASLKGDNELR VHKIYPLGLT 480 QRQALYNFKF EGNSSLSTHI QHNPCAKFEI KDEIERCIKK YMNLEQTITY LHEKYHIHHV 540 ITSAIWERLQ EGNPDFFEEY YKRCEVARQI AAFNDLLAQQ VDLMHKLREI ELSNVAPGDG 600 FTNNSGSTAT TGSDATKETR KKNQ* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| TIGR01589 | A_thal_3526 | 2.0e-13 | 510 | 563 | 54 | + uncharacterized plant-specific domain TIGR01589. This model represents an uncharacterized plant-specific domain 57 residues in length. It is found toward the N-terminus of most proteins that contain it. Examples include at least 10 proteins from Arabidopsis thaliana and at least one from Oryza sativa. |
| pfam09713 | A_thal_3526 | 5.0e-15 | 510 | 563 | 54 | + Plant protein 1589 of unknown function (A_thal_3526). This plant-specific family of proteins is defined by an uncharacterized region 57 residues in length. It is found toward the N terminus of most proteins that contain it. Examples include at least several proteins from Arabidopsis thaliana and Oryza sativa. The function of the proteins are unknown. |
| pfam00852 | Glyco_transf_10 | 1.0e-20 | 191 | 378 | 198 | + Glycosyltransferase family 10 (fucosyltransferase). This family of Fucosyltransferases are the enzymes transferring fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is know as glycosyltransferase family 10. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008417 | fucosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM77473.1 | 0 | 97 | 510 | 2 | 413 | core alpha 1,3-fucosyltransferase [Arabidopsis thaliana] |
| GenBank | AAO64480.1 | 0 | 1 | 510 | 1 | 510 | core alpha 1, 3-fucosyltransferase [Arabidopsis thaliana] |
| GenBank | AAQ83526.1 | 0 | 1 | 510 | 1 | 498 | alpha 1,3 fucosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_175393.1 | 0 | 1 | 510 | 1 | 510 | FUT12 (FUCOSYLTRANSFERASE 12); fucosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_188559.1 | 0 | 1 | 510 | 1 | 498 | FUT11 (FUCOSYLTRANSFERASE 11); 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase/ fucosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2nzy_C | 0.0000002 | 255 | 386 | 211 | 340 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 2nzy_B | 0.0000002 | 255 | 386 | 211 | 340 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 2nzy_A | 0.0000002 | 255 | 386 | 211 | 340 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 2nzx_C | 0.0000002 | 255 | 386 | 211 | 340 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 2nzx_B | 0.0000002 | 255 | 386 | 211 | 340 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CK120486 | 265 | 144 | 408 | 0 |
| EV204857 | 221 | 215 | 435 | 0 |
| DT732791 | 283 | 205 | 487 | 0 |
| EH736107 | 257 | 149 | 405 | 0 |
| CO076716 | 256 | 163 | 418 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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