| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra019015 |
| Family | GT14 |
| Protein Properties | Length: 291 Molecular Weight: 32777.7 Isoelectric Point: 8.2012 |
| Chromosome | Chromosome/Scaffold: 06 Start: 755838 End: 757055 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 3 | 199 | 0 |
| SKIGNVYMITKANLVTYTGPTMVANTLHACAILLKRSPDWDWFINLSASDYPLVTQDDLLYTFSTLDRNLNFIDHTSDLGWKNEKRAMPLMVDPGLYMLN KADILWVRAGRSLPTAFKLHTGSAWMALSRSFVEYIIWGWDNLPRTLLMYYTNFVSSPEGYFHTVICNAPEFSKTVVNHDLHYIAWDRPPRQHPRTL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 291 Download |
| MYSKIGNVYM ITKANLVTYT GPTMVANTLH ACAILLKRSP DWDWFINLSA SDYPLVTQDD 60 LLYTFSTLDR NLNFIDHTSD LGWKNEKRAM PLMVDPGLYM LNKADILWVR AGRSLPTAFK 120 LHTGSAWMAL SRSFVEYIIW GWDNLPRTLL MYYTNFVSSP EGYFHTVICN APEFSKTVVN 180 HDLHYIAWDR PPRQHPRTLS LGDMEPMIAS GAPFARKFSR DDSALDKIDK ELLMRTNKGG 240 FTPGGWCGGK KECTVVEDVA KIRPGLGAER LKGLVDRLVA EAKSGQNQCE * 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 6.0e-74 | 1 | 208 | 212 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 1 | 289 | 289 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF87858.1 | 0 | 1 | 289 | 117 | 405 | AC022520_2 Hypothetical protein [Arabidopsis thaliana] |
| GenBank | AAK83637.1 | 0 | 1 | 290 | 134 | 424 | AT3g15350/K7L4_15 [Arabidopsis thaliana] |
| RefSeq | NP_175718.2 | 0 | 1 | 289 | 136 | 422 | acetylglucosaminyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_566506.1 | 0 | 1 | 290 | 134 | 424 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002329084.1 | 0 | 1 | 290 | 131 | 419 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0005 | 3 | 221 | 134 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0005 | 3 | 221 | 134 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0005 | 3 | 221 | 134 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0005 | 3 | 221 | 134 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.002 | 3 | 221 | 134 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX134385 | 271 | 22 | 291 | 0 |
| EV528786 | 248 | 5 | 252 | 0 |
| CO123116 | 253 | 1 | 253 | 0 |
| JG697727 | 288 | 1 | 288 | 0 |
| FD736456 | 290 | 7 | 291 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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