| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra019047 |
| Family | GT14 |
| Protein Properties | Length: 409 Molecular Weight: 46114.7 Isoelectric Point: 9.2251 |
| Chromosome | Chromosome/Scaffold: 03 Start: 26566283 End: 26567734 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 66 | 320 | 0 |
| GYLVSGSKGDLESLWRVLRALYHPRNQYVVHLDLESPAEERIELAKRVREDPVFNDVGNVHMITKANLVTYRGPTMVANTLHACAILLKKSKDWDWFINL SASDYPLVTQDDLIHTFTGLDRNLNFIDYTSKLGWKAEKRAKPLIIDPGLYSTKKSDVFWVTPRRTMPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRT LLMYYTNFLSTPEGYFQTVICNTPEYSSTVVNHDLHYISWDRPPKQHPRTLNISD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 409 Download |
| MASLMFIFLT AASFNMGLLS SVRSINSLIF SSNLSPSNET TVEFVESKTN NHSSPPPHVQ 60 SSPRFGYLVS GSKGDLESLW RVLRALYHPR NQYVVHLDLE SPAEERIELA KRVREDPVFN 120 DVGNVHMITK ANLVTYRGPT MVANTLHACA ILLKKSKDWD WFINLSASDY PLVTQDDLIH 180 TFTGLDRNLN FIDYTSKLGW KAEKRAKPLI IDPGLYSTKK SDVFWVTPRR TMPTAFKLFT 240 GSAWMVLSRS FVEYCIWGWD NLPRTLLMYY TNFLSTPEGY FQTVICNTPE YSSTVVNHDL 300 HYISWDRPPK QHPRTLNISD TERMIASGAV FARKFKHDDL ALDKIDIELL GRGGNGGNFT 360 PGGWCADKHK CSKVGDPSKI NPGPGANRLQ ELVSRLVSAS KVDQRKCR* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 4.0e-89 | 65 | 325 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 1 | 408 | 408 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB43880.1 | 0 | 16 | 408 | 1 | 384 | putative protein [Arabidopsis thaliana] |
| EMBL | CBI20295.1 | 0 | 1 | 408 | 11 | 416 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_194478.3 | 0 | 15 | 408 | 30 | 421 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_566506.1 | 0 | 1 | 408 | 16 | 424 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002533550.1 | 0 | 1 | 408 | 16 | 417 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00000000009 | 76 | 350 | 96 | 377 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00000000009 | 76 | 350 | 96 | 377 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00000000009 | 76 | 350 | 96 | 377 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00000000009 | 76 | 350 | 96 | 377 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0000000003 | 76 | 350 | 96 | 377 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
