| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra019120 |
| Family | GH35 |
| Protein Properties | Length: 713 Molecular Weight: 79861.7 Isoelectric Point: 6.669 |
| Chromosome | Chromosome/Scaffold: 03 Start: 26229090 End: 26233526 |
| Description | beta-galactosidase 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 37 | 322 | 0 |
| IINGQRRILLSGSIHYPRSTPEMWPDLIQKAKEGGLDYYFEERYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKFVPDMAFRTDNEPFKAAM QKFTEKIVGMMKQEKLFETQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAAQMAEGLSTGVPWIMCKQDEDVPDSIINTCNGFYCEGFKPKSDNKPKMW TENWTGWYPEFGGAVPYRPAEDIAFSVARFIHNGGSFMNYYMYHGGTNFDRTAGQFIATSYDYDAPLDEYGLPREPKYSHLTKLHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 713 Download |
| MGLNFRYKAW VFLWVLCCSS LICSVKATVT YDHKAVIING QRRILLSGSI HYPRSTPEMW 60 PDLIQKAKEG GLDYYFEERY DLVKFIKLVQ QAGLYVHLRI GPYVCAEWNF GGFPVWLKFV 120 PDMAFRTDNE PFKAAMQKFT EKIVGMMKQE KLFETQGGPI ILSQIENEYG PVEWEIGAPG 180 KAYTKWAAQM AEGLSTGVPW IMCKQDEDVP DSIINTCNGF YCEGFKPKSD NKPKMWTENW 240 TGWYPEFGGA VPYRPAEDIA FSVARFIHNG GSFMNYYMYH GGTNFDRTAG QFIATSYDYD 300 APLDEYGLPR EPKYSHLTKL HKVIKLCEPA LVSVDPTVTW LGDKLEAHVF KSNSSCAAFL 360 SNYNDSSAAR VSFWGSTYDL PPWSVSILPD CKTEYYNTAK VRTPSIHMKM VPTNTKLSWG 420 SYNEEIPSPN DNDNGTFSQD GLVEQISMTR DKTDYLWYLA DVEVSDDEKF LTTGEDPLLT 480 IESSGHALSV FVNGQLAGTA YGSLEKPKLT FSQKIKLHAG VNKLALLSIA AGLPNGGVHY 540 ETWNTGVLGP VTLTGVNSGT WDMSKWKWSY KIGTKGESLS LHTEGSTVEW KEGSLVATKQ 600 PLTWYKSTFD TPAGNEPLAL DMNTMGKGQV WINGKNIGRH WPAYTVRGNC ERCSYAGTFT 660 EKKCLSNCGE ASQRWYHVPR SWLKPSANLI VVLEELGGDP NGISLVIRTG KQ* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 2.0e-16 | 29 | 315 | 352 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 5.0e-142 | 37 | 324 | 320 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 11 | 709 | 719 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB39679.1 | 0 | 1 | 711 | 1 | 729 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_190852.2 | 0 | 1 | 711 | 1 | 727 | BGAL2 (beta-galactosidase 2); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | NP_200498.1 | 0 | 1 | 709 | 1 | 724 | BGAL4 (beta-galactosidase 4); beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_849553.1 | 0 | 1 | 711 | 1 | 728 | BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| Swiss-Prot | Q9LFA6 | 0 | 1 | 711 | 1 | 727 | BGAL2_ARATH RecName: Full=Beta-galactosidase 2; Short=Lactase 2; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-30 | 26 | 320 | 5 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3e-27 | 29 | 328 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3e-27 | 29 | 328 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
