| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra019237 |
| Family | GH9 |
| Protein Properties | Length: 620 Molecular Weight: 69811.2 Isoelectric Point: 9.1475 |
| Chromosome | Chromosome/Scaffold: 03 Start: 25542819 End: 25545272 |
| Description | glycosyl hydrolase 9A3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 108 | 582 | 0 |
| NYTLALNKTLLFFNAQKSGKLPKKNNVSWRGNSCMKDVDEGEYPPRDVVGGYYDAGDTIKFSFPMSYAMTMLSWSVIEYSAKYEAAGELDHVKEIIKWGT DYFLKTFNSSADTVDRMVSQVGFGDTRGGSVVHNDHYCWMRPEDIDYKRPVHTCYSGCSDLAAEMAAALASASIVFKDDRDYSKKLVHGAKTLYNFANFN KKSYSKPYDESSEFYKSSLFWDELLWGGAWLYYATGNITYLDQVTNDDMARHAGAFWDGPYYGVPSWDNKLPGAQLLLTRLRLFLGPGYPYEDILRTFHN QTGVIMCSYLPYYKKFKRTKGGLIKLNHGDPQPLQYAANAAFLAALFSDYLDAADTPGWYCGPKFYSTDVLRDFARSQIDYILGKNPRKMSYVVGFGQRY PKHVHHRGASIPKSVKKESCKGGWKWRDTKKNNPNTIVGAMVAGPDKHDGFHDLRTNYNYTEPTLAGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 620 Download |
| MYGRDPWGGP LEINAADSIT DDDRSRNLQE LDRSTLRRPL DATQRSWLLG PPVRKKKKYV 60 DIGCMQVSRK IFLWTLGTLL VTTFLAGSIT MIVRHVPHHK HEKPQQDNYT LALNKTLLFF 120 NAQKSGKLPK KNNVSWRGNS CMKDVDEGEY PPRDVVGGYY DAGDTIKFSF PMSYAMTMLS 180 WSVIEYSAKY EAAGELDHVK EIIKWGTDYF LKTFNSSADT VDRMVSQVGF GDTRGGSVVH 240 NDHYCWMRPE DIDYKRPVHT CYSGCSDLAA EMAAALASAS IVFKDDRDYS KKLVHGAKTL 300 YNFANFNKKS YSKPYDESSE FYKSSLFWDE LLWGGAWLYY ATGNITYLDQ VTNDDMARHA 360 GAFWDGPYYG VPSWDNKLPG AQLLLTRLRL FLGPGYPYED ILRTFHNQTG VIMCSYLPYY 420 KKFKRTKGGL IKLNHGDPQP LQYAANAAFL AALFSDYLDA ADTPGWYCGP KFYSTDVLRD 480 FARSQIDYIL GKNPRKMSYV VGFGQRYPKH VHHRGASIPK SVKKESCKGG WKWRDTKKNN 540 PNTIVGAMVA GPDKHDGFHD LRTNYNYTEP TLAGNAGLVA ALVALSGERT FGAIDKNTMF 600 SAVPPLTPAT PPPPAPWTP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 8.0e-100 | 108 | 571 | 475 | + endoglucanase | ||
| PLN00119 | PLN00119 | 1.0e-100 | 73 | 570 | 511 | + endoglucanase | ||
| PLN02613 | PLN02613 | 6.0e-106 | 105 | 571 | 478 | + endoglucanase | ||
| PLN02345 | PLN02345 | 4.0e-121 | 112 | 571 | 468 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 7.0e-147 | 108 | 571 | 469 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC49704.1 | 0 | 1 | 603 | 1 | 601 | endo-1,4-beta-glucanase [Solanum lycopersicum] |
| GenBank | AAN72232.1 | 0 | 1 | 603 | 1 | 605 | At5g49720/K2I5_8 [Arabidopsis thaliana] |
| EMBL | CAB51903.1 | 0 | 1 | 603 | 1 | 605 | cellulase; endo-1,4-beta-D-glucanase [Brassica napus] |
| RefSeq | NP_194157.1 | 0 | 1 | 607 | 1 | 608 | ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_199783.1 | 0 | 1 | 603 | 1 | 605 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 108 | 585 | 4 | 428 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1ksc_A | 0 | 108 | 585 | 4 | 428 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1ks8_A | 0 | 108 | 585 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 108 | 588 | 25 | 465 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 108 | 588 | 5 | 443 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
