| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra019455 |
| Family | GH9 |
| Protein Properties | Length: 487 Molecular Weight: 53823.2 Isoelectric Point: 7.952 |
| Chromosome | Chromosome/Scaffold: 06 Start: 13489015 End: 13491424 |
| Description | glycosyl hydrolase 9A4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 33 | 480 | 0 |
| NYKEALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLAGGYYDAGDNVKYGLPMAFTITTLAWSTINYEKELHAAGELENTRAAIRWGTDYL LKCASRENRLYVQVGDPNADHKCWARPENMQTPRTVLEISDKDPGTEIAAETAAALAASSIVFRHIDHMYSRQLLNKAKLLFKLAKSHKGTYDGACPFYC SNSGYNDELLWAATWLYKATRIEVYLSYLKFEAISAYVAEFSWDLKYAGAQILILEMIFEGAKGLDLYKQQADSFICSNIPESQYHQVFTTPGGLIHLRD GANTQYVTATAFLFSAYADILQKHNQKITCGSKQFDSTNLMAFAKKQIDYILGHNPKGRSYMVGFGPNPPMQAHHRGASVPVAEGNEPLSCPMSFVKWFN KNQPNANELTGAIVGGPDRQDNFQDFRWTSAYTEPCTYINSIAVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 487 Download |
| MGSPGDKARR NVVIRAILLG LISIVCVNGT IINYKEALTK SLIFLEAQRS GKLPPNNRVP 60 WRGDSALDDG KLANVDLAGG YYDAGDNVKY GLPMAFTITT LAWSTINYEK ELHAAGELEN 120 TRAAIRWGTD YLLKCASREN RLYVQVGDPN ADHKCWARPE NMQTPRTVLE ISDKDPGTEI 180 AAETAAALAA SSIVFRHIDH MYSRQLLNKA KLLFKLAKSH KGTYDGACPF YCSNSGYNDE 240 LLWAATWLYK ATRIEVYLSY LKFEAISAYV AEFSWDLKYA GAQILILEMI FEGAKGLDLY 300 KQQADSFICS NIPESQYHQV FTTPGGLIHL RDGANTQYVT ATAFLFSAYA DILQKHNQKI 360 TCGSKQFDST NLMAFAKKQI DYILGHNPKG RSYMVGFGPN PPMQAHHRGA SVPVAEGNEP 420 LSCPMSFVKW FNKNQPNANE LTGAIVGGPD RQDNFQDFRW TSAYTEPCTY INSIAVGVLA 480 KLAATA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 1.0e-151 | 11 | 484 | 492 | + endoglucanase | ||
| PLN02266 | PLN02266 | 1.0e-154 | 33 | 483 | 462 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 1.0e-156 | 33 | 480 | 463 | + Glycosyl hydrolase family 9. | ||
| PLN02613 | PLN02613 | 1.0e-173 | 12 | 482 | 474 | + endoglucanase | ||
| PLN02909 | PLN02909 | 0 | 7 | 484 | 481 | + Endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB83158.1 | 0 | 7 | 484 | 5 | 482 | cellulase-like protein [Arabidopsis thaliana] |
| EMBL | CAN82881.1 | 0 | 27 | 483 | 8 | 464 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI20730.1 | 0 | 16 | 476 | 17 | 475 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI20730.1 | 0 | 18 | 484 | 502 | 968 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189972.2 | 0 | 7 | 484 | 5 | 485 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 33 | 484 | 4 | 430 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 1ksc_A | 0 | 33 | 484 | 4 | 430 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 1ks8_A | 0 | 33 | 484 | 4 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 32 | 482 | 24 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 32 | 482 | 4 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
