| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra019633 |
| Family | CE6 |
| Protein Properties | Length: 249 Molecular Weight: 27088.1 Isoelectric Point: 5.1015 |
| Chromosome | Chromosome/Scaffold: 06 Start: 5404939 End: 5406407 |
| Description | Domain of unknown function (DUF303) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE6 | 61 | 153 | 6.7e-28 |
| GPGMSFANLVVNRFDKVGLVPCSVGGTKLSQWQKGEFLYEETVKRAKEAVASGGGSYQAVLWYQGESDTVDMVDASDYKRRLIKFFNDLRSDL | |||
| Full Sequence |
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| Protein Sequence Length: 249 Download |
| MAGRGGVYND STKNIIVWDG VIPPECRSNP SILHLTAKLE WEEAKEPLHA DIDVNKTNGV 60 GPGMSFANLV VNRFDKVGLV PCSVGGTKLS QWQKGEFLYE ETVKRAKEAV ASGGGSYQAV 120 LWYQGESDTV DMVDASDYKR RLIKFFNDLR SDLQHPNLPI VQVALATGAG PYLDVVRKAQ 180 LETDLENVNC VDAMGLPLEP DGLHLTTSSQ VRLGQMMVDA FLAIRPIPSS AKLFSGLSVL 240 VLFPLFLL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03629 | DUF303 | 3.0e-25 | 28 | 224 | 241 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB86905.1 | 0 | 1 | 163 | 1 | 164 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_190869.3 | 0 | 1 | 232 | 40 | 269 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002283036.1 | 0 | 1 | 230 | 38 | 261 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327179.1 | 0 | 1 | 237 | 34 | 277 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510156.1 | 0 | 1 | 225 | 35 | 261 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2apj_D | 0 | 1 | 223 | 33 | 257 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_C | 0 | 1 | 223 | 33 | 257 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_B | 0 | 1 | 223 | 33 | 257 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_A | 0 | 1 | 223 | 33 | 257 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 1zmb_F | 3e-18 | 41 | 222 | 38 | 225 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DY291778 | 231 | 1 | 228 | 0 |
| DY299093 | 229 | 1 | 226 | 0 |
| DY277168 | 225 | 1 | 222 | 0 |
| ES822484 | 224 | 1 | 221 | 0 |
| DT564149 | 225 | 1 | 222 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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