| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra019644 |
| Family | GH35 |
| Protein Properties | Length: 713 Molecular Weight: 79696.8 Isoelectric Point: 8.0652 |
| Chromosome | Chromosome/Scaffold: 06 Start: 5254589 End: 5260317 |
| Description | beta-galactosidase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 21 | 323 | 0 |
| LIINGQKRILLSGSIHYPRSTPEMWPDLINKAKEGGLDVIQTYVFWNGHEPSPGQYYFGDRYDLVRFIKLVQQAGLYVSLRIGPYVCAEWNFGGIPVWLK YVPGMVFRTDNGPFKTAMQKFTKKIVDIMKEEKLFETQGGPIILSQIENEYGPMEWEIGSAGKAYTKWTAAMALGLSTGVPWVMCKQDDAPYPIINTCNG FYCEGFKPNSVDQPKMWTENWTGWFTEFGGAIPNRPVEDLAFSVARFIQNGGSFMNYYMYHGGTNFDRTSGEFITTSYDYDAPLDEYGLLREPKYSHLKE LHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 713 Download |
| MCFSLLICST KALVSYDHKA LIINGQKRIL LSGSIHYPRS TPEMWPDLIN KAKEGGLDVI 60 QTYVFWNGHE PSPGQYYFGD RYDLVRFIKL VQQAGLYVSL RIGPYVCAEW NFGGIPVWLK 120 YVPGMVFRTD NGPFKTAMQK FTKKIVDIMK EEKLFETQGG PIILSQIENE YGPMEWEIGS 180 AGKAYTKWTA AMALGLSTGV PWVMCKQDDA PYPIINTCNG FYCEGFKPNS VDQPKMWTEN 240 WTGWFTEFGG AIPNRPVEDL AFSVARFIQN GGSFMNYYMY HGGTNFDRTS GEFITTSYDY 300 DAPLDEYGLL REPKYSHLKE LHKIIKLCEP ALVSVDPTIN SLGNKQEAHV FKSKTSCAAF 360 LSNYDTTYPA KVMFRGFPYD LPPWSISILP DCKTEYHNTA KIRSPSILMK MVPTSTRLSW 420 ESYNEAIPSS GDYGTFARDG LLEQISMTRD KTDYFWYLTD ITISSNEGFL KTGEDPLLTI 480 CSAGHALHVF VNGQLAGTSY GALSSPKLTF SQRIKLREGV NKLAILNTAV GLPNAGVHYE 540 TWNTGVLGPA TLNGVNSGAW DMSKWKWSYK IGTKGEAMSL HTTTGSSSVE WTEGSFVAVK 600 QPLTWYKSSF NAPVGNEPIA LDMNTMGKGQ VWVNGRNIGR HWPAYTAHGN CGRCNYAGIY 660 SEKKCLSNCG QSSQRWYHVP RSWLKPSGNL LVVFEEWGGD PSGISVVKRT DK* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 6.0e-7 | 36 | 172 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 2.0e-26 | 14 | 316 | 345 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 7.0e-158 | 20 | 323 | 320 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 3 | 710 | 709 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK96780.1 | 0 | 1 | 710 | 16 | 724 | beta-galactosidase [Arabidopsis thaliana] |
| EMBL | CAB39679.1 | 0 | 1 | 712 | 16 | 729 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_190852.2 | 0 | 1 | 712 | 16 | 727 | BGAL2 (beta-galactosidase 2); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | NP_849553.1 | 0 | 1 | 712 | 16 | 728 | BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| Swiss-Prot | Q9LFA6 | 0 | 1 | 712 | 16 | 727 | BGAL2_ARATH RecName: Full=Beta-galactosidase 2; Short=Lactase 2; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1.99993e-41 | 21 | 321 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-40 | 14 | 329 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-40 | 14 | 329 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778160 | 710 | 5 | 710 | 0 |
| HO780602 | 660 | 64 | 710 | 0 |
| HO795552 | 523 | 104 | 625 | 0 |
| HO795552 | 65 | 1 | 65 | 7e-39 |
| HO795552 | 40 | 65 | 104 | 7e-39 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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