| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra020110 |
| Family | GH17 |
| Protein Properties | Length: 341 Molecular Weight: 37074.5 Isoelectric Point: 4.5283 |
| Chromosome | Chromosome/Scaffold: 02 Start: 5083672 End: 5084694 |
| Description | beta-1,3-glucanase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 29 | 339 | 0 |
| VGLNYGLLGDNLPPPPQVINLYKSIGITKIRIFDPNVEVLNALRGHQDIGVTVGVKDQDLAALAASEEAVKGWFATNIEPYLTDVNITFITVGNEVIPGP LGSQVLPVVKSLTNLVESRSLQISITTVVSMANLGESYPPSSGTFTPLAREQLTPVLKFLSEKSVPILVNMYPYFPYASDPVNIHLDYATFNTEALVVQD GPLGYSNMFDAMYDAFLWAMEKEGVEDLPLVVSETGWPSAGNGDLTTPLIASTYNRNFVKHIESGKGTPKRSNCSIDGYIFATFNENLKPAGTEQHFGLF EPTDMKPVYKL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 341 Download |
| MDCLKKTLLF LLSCTAILLS NNIVAATNVG LNYGLLGDNL PPPPQVINLY KSIGITKIRI 60 FDPNVEVLNA LRGHQDIGVT VGVKDQDLAA LAASEEAVKG WFATNIEPYL TDVNITFITV 120 GNEVIPGPLG SQVLPVVKSL TNLVESRSLQ ISITTVVSMA NLGESYPPSS GTFTPLAREQ 180 LTPVLKFLSE KSVPILVNMY PYFPYASDPV NIHLDYATFN TEALVVQDGP LGYSNMFDAM 240 YDAFLWAMEK EGVEDLPLVV SETGWPSAGN GDLTTPLIAS TYNRNFVKHI ESGKGTPKRS 300 NCSIDGYIFA TFNENLKPAG TEQHFGLFEP TDMKPVYKLF * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 106 | 329 | 232 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-103 | 29 | 339 | 314 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM62473.1 | 0 | 5 | 340 | 6 | 345 | beta-1,3-glucanase bg4 [Arabidopsis thaliana] |
| RefSeq | NP_174592.1 | 0 | 5 | 340 | 6 | 335 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | NP_197533.1 | 0 | 5 | 340 | 6 | 345 | BETAG4; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197534.1 | 0 | 5 | 340 | 6 | 354 | BG5 (beta-1,3-glucanase 5); glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197539.1 | 0 | 1 | 340 | 1 | 344 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 339 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 29 | 334 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 29 | 334 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 29 | 334 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 29 | 334 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
