| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra020139 |
| Family | GH3 |
| Protein Properties | Length: 639 Molecular Weight: 69445.5 Isoelectric Point: 9.7148 |
| Chromosome | Chromosome/Scaffold: 02 Start: 5210939 End: 5214267 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 107 | 350 | 0 |
| STRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGVTRQGPPKRFCYLDPNLLKRIGAATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDYRIVQQ MTEIIPGLQGDLPTKRRGVPFVGGKSKVAACAKHFVGDGGTVRGIDENNTVTDKNGLFGIHMPGYYNAVNKGVATVMVSYSALNGLRMHANKELVTGFLK NKLKFRGFVISDWQGIDRITNPPHLNYSASLYAGISAGIDMIMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 639 Download |
| MGTLSKALCL LLLYCVSASA AATGCYLKYK DPKQPLGARI RDLMNRMTLQ EKIGQMVQIE 60 RTVATPEVMK KYFIGSVLSG GGSVPSPKAT PETWVNMVNE IQKASLSTRL GIPMIYGIDA 120 VHGHNNVYGA TIFPHNVGLG VTRQGPPKRF CYLDPNLLKR IGAATALEVR ATGIPYAFAP 180 CIAVCRDPRW GRCYESYSED YRIVQQMTEI IPGLQGDLPT KRRGVPFVGG KSKVAACAKH 240 FVGDGGTVRG IDENNTVTDK NGLFGIHMPG YYNAVNKGVA TVMVSYSALN GLRMHANKEL 300 VTGFLKNKLK FRGFVISDWQ GIDRITNPPH LNYSASLYAG ISAGIDMIMV PYNYTEFIDE 360 INSQIKKKLI PMSRIDDAVK RILRVKFTMG LFEEPLADLS FANQLGSKEH RELAREAVRK 420 SLVLLKNGKN KGDKPLLPLP KKTGKILVAG GHADNLGYQC GGWTITWQGL NGNDLTVGTT 480 ILTAVKNTVA PTTQVVYNAN PDANFVKSGK FDYAIVVVGE PPYAEMFGDS TNLTISEPGP 540 STIGNVCGSV KCVVVVVSGR PVVMQPYVSK IDALVAAWLP GTEGQGVADA LFGDYGFTGK 600 LARTWFKSVK QLPMNVGDKY YDPLYPFGYG LTTKPNKL* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK15098 | PRK15098 | 2.0e-12 | 572 | 632 | 83 | + beta-D-glucoside glucohydrolase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 4.0e-32 | 422 | 632 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 4.0e-51 | 32 | 427 | 408 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 2.0e-74 | 47 | 481 | 445 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-83 | 48 | 385 | 342 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ17461.1 | 0 | 26 | 635 | 25 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
| EMBL | CAA07070.1 | 0 | 10 | 636 | 12 | 626 | beta-D-glucosidase [Tropaeolum majus] |
| RefSeq | NP_197595.2 | 0 | 1 | 638 | 1 | 624 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002313632.1 | 0 | 1 | 637 | 1 | 626 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523935.1 | 0 | 26 | 637 | 29 | 631 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 26 | 637 | 2 | 603 | A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 |
| PDB | 1iex_A | 0 | 26 | 637 | 2 | 603 | A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 |
| PDB | 1iew_A | 0 | 26 | 637 | 2 | 603 | A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 |
| PDB | 1iev_A | 0 | 26 | 637 | 2 | 603 | A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 |
| PDB | 1ieq_A | 0 | 26 | 637 | 2 | 603 | A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
