| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra020174 |
| Family | GT50 |
| Protein Properties | Length: 438 Molecular Weight: 50986.2 Isoelectric Point: 9.6325 |
| Chromosome | Chromosome/Scaffold: 02 Start: 5419789 End: 5421617 |
| Description | mannosyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT50 | 139 | 413 | 0 |
| IGTRGNCEPIVCAMLLWIIISLMKGNLSQAAFWYGLVVHFRVYPIIYALPIILVLDSKLFRSGHKPPLEDWNTHTSSTEKKTFHLKSLFSRERIMFGLIS GGVFLACNAVSFYFYGHEFLHEALLYHLTRTDPRHNFSIYFYHIYLHYERQFSAVEKLISFLPQFTVQLALVFSFSKDLVFCMFLQTVAFVAFNKVITAQ YFVWFYCLLPLILPWSRMKLKWEGLLCIILWIGAQTHWLLWGYMLEFKGVNVFLQLWMASLVFLAANTFVLVKII | |||
| Full Sequence |
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| Protein Sequence Length: 438 Download |
| MSRGSEKPDE SPKWMSFRTL LVSSMLLRVF LIIYGEWQDA HMEVRYTDID YTVFSDAASL 60 MASGESPYKR TTYRYSPLLA LLLVPNSIFH RSWGKFIFSA SDLLVGLFIR EILKLRKVSE 120 KVCTVSVMVW LLNPFTFTIG TRGNCEPIVC AMLLWIIISL MKGNLSQAAF WYGLVVHFRV 180 YPIIYALPII LVLDSKLFRS GHKPPLEDWN THTSSTEKKT FHLKSLFSRE RIMFGLISGG 240 VFLACNAVSF YFYGHEFLHE ALLYHLTRTD PRHNFSIYFY HIYLHYERQF SAVEKLISFL 300 PQFTVQLALV FSFSKDLVFC MFLQTVAFVA FNKVITAQYF VWFYCLLPLI LPWSRMKLKW 360 EGLLCIILWI GAQTHWLLWG YMLEFKGVNV FLQLWMASLV FLAANTFVLV KIIQRHRFSP 420 LFGQYVSSDG KNVKKLD* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06728 | PIG-U | 8.0e-6 | 56 | 193 | 150 | + GPI transamidase subunit PIG-U. Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the carboxyl-terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI. | ||
| pfam05007 | Mannosyl_trans | 2.0e-71 | 139 | 413 | 277 | + Mannosyltransferase (PIG-M). PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates. | ||
| PLN02841 | PLN02841 | 0 | 10 | 437 | 440 | + GPI mannosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005789 | endoplasmic reticulum membrane |
| GO:0006506 | GPI anchor biosynthetic process |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP59446.1 | 0 | 15 | 437 | 1 | 435 | PEANUT1 [Arabidopsis thaliana] |
| EMBL | CAC34506.1 | 0 | 1 | 437 | 1 | 417 | mannosyltransferase-like protein [Arabidopsis thaliana] |
| EMBL | CBI36197.1 | 0 | 42 | 435 | 1 | 405 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_680199.1 | 0 | 1 | 437 | 1 | 450 | PNT1 (PEANUT 1); alpha-1,4-mannosyltransferase/ mannosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002280567.1 | 0 | 15 | 435 | 1 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
