| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra020269 |
| Family | AA1 |
| Protein Properties | Length: 573 Molecular Weight: 63356.8 Isoelectric Point: 9.5524 |
| Chromosome | Chromosome/Scaffold: 02 Start: 5947074 End: 5949101 |
| Description | laccase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 24 | 565 | 0 |
| TRHYTLDIKMHNVTRLCHTKSLVSVNGKFPGPKIIAREGDQLLIKVVNHVPNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIVGQRGTLW YHAHISWLRATVYGPLIILPKHGVPYPFPKPHKEVPMVFGEWFSAVTEAIIRQATLTGGGPNVSDAYTINGLPGPLYTCSAKDTFRLRVKAGKTYLLRII NAALNDELFFSIANHTVTVVEADAVYVKPFETNTILIAPGQTTNVLLKTKPSYPSASFFMTARPYATGQGTFDNTTVAGILEYEQPKHSKTNIKNLPLFT PVLPALNDTNFATKFSNKLRSLNSQKFPANVPQEVDRKFFFTGGLGNTPCNHKNNQTCLGPTNTTMFAASISNISFTLPTKALLQSHYSGRSNGVYSPNF PWSPIVPFNYTGTPPNNTMVSTGTNVMVLRYNTSVELVMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPKNDPKKFNLVDPIERNTVGVPSGGWAAIR FLADNPGVWFMHCHLEVHTSWGLRMAWLVLDGDKPDQKLLPP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 573 Download |
| MASWLLFSVF SCVLLLPEPA FGITRHYTLD IKMHNVTRLC HTKSLVSVNG KFPGPKIIAR 60 EGDQLLIKVV NHVPNNISLH WHGIRQLRSG WADGPAYITQ CPIQTGQSYV YNYTIVGQRG 120 TLWYHAHISW LRATVYGPLI ILPKHGVPYP FPKPHKEVPM VFGEWFSAVT EAIIRQATLT 180 GGGPNVSDAY TINGLPGPLY TCSAKDTFRL RVKAGKTYLL RIINAALNDE LFFSIANHTV 240 TVVEADAVYV KPFETNTILI APGQTTNVLL KTKPSYPSAS FFMTARPYAT GQGTFDNTTV 300 AGILEYEQPK HSKTNIKNLP LFTPVLPALN DTNFATKFSN KLRSLNSQKF PANVPQEVDR 360 KFFFTGGLGN TPCNHKNNQT CLGPTNTTMF AASISNISFT LPTKALLQSH YSGRSNGVYS 420 PNFPWSPIVP FNYTGTPPNN TMVSTGTNVM VLRYNTSVEL VMQDTSILGA ESHPLHLHGF 480 NFFVVGQGFG NFDPKNDPKK FNLVDPIERN TVGVPSGGWA AIRFLADNPG VWFMHCHLEV 540 HTSWGLRMAW LVLDGDKPDQ KLLPPPADLP KC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 3.0e-51 | 30 | 146 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 7.0e-60 | 20 | 546 | 553 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 1.0e-71 | 24 | 548 | 559 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 2.0e-85 | 24 | 546 | 559 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 22 | 572 | 552 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16199.1 | 0 | 12 | 572 | 2 | 566 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200810.1 | 0 | 1 | 572 | 1 | 577 | LAC17 (laccase 17); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002284473.1 | 0 | 9 | 572 | 16 | 585 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002520231.1 | 0 | 10 | 572 | 19 | 580 | laccase, putative [Ricinus communis] |
| RefSeq | XP_002531824.1 | 0 | 3 | 572 | 11 | 576 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 25 | 546 | 4 | 517 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1asq_A | 0 | 25 | 546 | 4 | 517 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1asp_B | 0 | 25 | 546 | 4 | 517 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1asp_A | 0 | 25 | 546 | 4 | 517 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1aso_B | 0 | 25 | 546 | 4 | 517 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
